Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02468 ATGGCTCTCTCTAAGCTTCTTCTTGCATCCCTTTTGGTATCTTTTGCCCTTCTCCATCTCGTTGATGCTGATCCACCGAAGGTAGACGCACAGCCTCAGGGCTCTGTTCTTCAACAGATAGATTGTAATGGAGCATGTGCTGCAAGATGCCGTTTAGCATCTCGTCAACGCATGTGCCACAGAGCGTGTGGAACTTGCTGCAGACGCTGCAACTGCGTGCCACCGGGAACTTCCGGTAACCAAGAAGTGTGCCCCTGTTATGCCAGCCTCACCACCCATGGTGGCAGACGCAAGTGCCCTTAG 303 0.5314 MALSKLLLASLLVSFALLHLVDADPPKVDAQPQGSVLQQIDCNGACAARCRLASRQRMCHRACGTCCRRCNCVPPGTSGNQEVCPCYASLTTHGGRRKCP* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02468 100 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 4 100 - -
Rops10g02468 100 Pfam Gibberellin regulated protein 41 100 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02468 Rops-Chr10 43134601 43135495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02468 - - gmx:100790448 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02608 9 48877618 48878560 Rops10g02468 10 43134601 43135495 PCT
Rops10g02468 10 43134601 43135495 Rops9g02611 9 48923282 48924005 PCT