Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02457 ATGGCCTTAAGAAAATCAAGTAGACTTCCTCAAACAGCACTCATTAAGCAAATCCTCAAGAGATGTTCAAGTTTAGGGAAGAAACAAGGCTATGATGACCAAGGCCTTCGTTTGGATGTCCCTAAGGGTCACTTTGCTGTATATGTTGGAGAAAATAGAAGCAGGTACATTGTTCCAATTTCCTTTCTAAGTCGACCAGAGTTCCAAACACTTCTCCATCAAGCAGAAGAAGAGTTTGGCTTTGATCATGAAAAGGGTCTCACAATTCCATGTGAAGAAGATGTTTTTGAGTCTCTTACATCCATGCTCAGATGA 315 0.4032 MALRKSSRLPQTALIKQILKRCSSLGKKQGYDDQGLRLDVPKGHFAVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCEEDVFESLTSMLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02457 104 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Rops10g02457 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02457 Rops-Chr10 42969024 42969627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02457 39 99 Calmodulin-binding Proteins AT3G43120 57.377 4.09e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02457 K14488 - gmx:100305700 188.348