Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02455 ATGTCGGGGGGACTCGGAAAATGCAGCAGAATCCGGTACATCGTGAAGCTCCGGCAAATGCTCCGGCGGTGGAGGAGCAAGGCACGCATATCAGCACATCAAACACCGCCTGATGTTCCTTCGGGACACGTGGCGGTGTGCGTGGGCATCAACTACAGGAGATTTGTGGTGCGCGCCACTTACCTGAACCACCCCATCTTCCAGAAGCTACTAGTTAAAGCTGAGGAAGAGTACGGGTTCTCTAACAACGGTCCCCTAACCATTCCTTGCGACGAAGTGGTCTTCGAAGAGTTGCTCCGGTTTATTTCTCGACCCGGTTCAGGCAACTCGACCCGGTTCGAGGACTTTCACAGATACTGCCACGTGGACTTGTTGTGCCCCGAGTCTCGACCGCTACTCACTCACGAAACCATTTCGTAG 420 0.5476 MSGGLGKCSRIRYIVKLRQMLRRWRSKARISAHQTPPDVPSGHVAVCVGINYRRFVVRATYLNHPIFQKLLVKAEEEYGFSNNGPLTIPCDEVVFEELLRFISRPGSGNSTRFEDFHRYCHVDLLCPESRPLLTHETIS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02455 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 98 IPR003676 GO:0009733
Rops10g02455 139 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02455 Rops-Chr10 42909136 42909555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02455 5 133 Calmodulin-binding Proteins AT4G34750 51.064 7.53e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02455 K14488 - pvy:116128629 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02455 10 42909136 42909555 Rops10g02455 10 42909136 42909555 ECH
Rops9g02625 9 49215403 49215816 Rops10g02455 10 42909136 42909555 PCT