Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02451 ATGCGTGGATTGCAAAATTCGAGAAAAGTTTCATGGGCCTCTGATTTAGATCTTTGTCAGGTTAGGTTATTCTTATCAGAGGAACCTCCTTCACAAGTTGGGTTTAATTCTCAAGATCACCTCCAAGCAAAGACATCATTACTGTTGCCTCCAGGTGGAGCAGGTTCTGATGATGTTCTGCCTCCTGGATTTGAGGGAAGTCATGCTTCAAGTCAGTTTGAGATCAAGCCATCCCAAATACCAGTTATTAGGTGGATTAGTCCACCAAAGATTGTGCTAAATCTCACATGGCAAGTGGTGGCCGGGGAAGAAAGCAAAGAGGTAGTGGATCAACATCAGAGGGAGATGAGAGTACTCGAAGCTATTTATCCTCGCGTATCTTCGATTCCTCCAAATCCTTCTGTTTCAATGGATGTTGAAGATTCCCATTACATTGACGGTCAAACTACTTTGATACCAATTACGCCTATTGAAGATGAAGATGCGACAACAGATGGATTATCTGATTCCTCGGAACAAGTTGAGGCTTCACAGTCTTTTGGATTACCTGCTGGTACATTGAATGGTTTGAACTCTACTACAAGTATGCAGTTAGCTCATGGTCTAGCATCTGATGTAGCTGCTGCATCTGTTGCTTTAACTAACATAGTGAAGAGCAATGAACATGGAAATTTGATTGACCACGAATTAATTAATAATATTCTTAACAATCCAGAAGTGATTGAGAAGTTGGTTAGAGATTATGGAGTTACTAATAATTCACAGTATGTACATAATGTGGGGTCGTCTTCGGTAGCTTTTTCACATCCTCCTATTTCTATTAATCAAGGAGAAACCTCTACTCCTTCATCAGTTGCTTTGTCAGCCGCTTCTTCCTATACTCACCCAACTGGAGGTCAAGTGGCAACGGTTTCTACCCAATGGCTTCCTAGATCTGCAGTGAGTACAGCTATTGTTTCTTCTCCTGTTGAGGTCCCTCCAACAAAAGATGCAAACTACTATAAGAGCTTAATTCAGCAACATGGAGGAGAAAAACAAGAAAAACTTCCATACTCCAGTAATCGTCAGATCCAGCAGCCGGTAACAAACTATGAGACAGCACACAATGTTAGAGCAAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGTTCTAGAGGATGTCGGAATGGAGCTAACTGTGCATACCAGCATGATGCATCATTCCAGCCACGAGGTAGTGCTGTATCAGGGATACAAAGTTCAAAGAGAATGAAAATGGATAATGAGATTAGCAGTTAA 1293 0.4107 MRGLQNSRKVSWASDLDLCQVRLFLSEEPPSQVGFNSQDHLQAKTSLLLPPGGAGSDDVLPPGFEGSHASSQFEIKPSQIPVIRWISPPKIVLNLTWQVVAGEESKEVVDQHQREMRVLEAIYPRVSSIPPNPSVSMDVEDSHYIDGQTTLIPITPIEDEDATTDGLSDSSEQVEASQSFGLPAGTLNGLNSTTSMQLAHGLASDVAAASVALTNIVKSNEHGNLIDHELINNILNNPEVIEKLVRDYGVTNNSQYVHNVGSSSVAFSHPPISINQGETSTPSSVALSAASSYTHPTGGQVATVSTQWLPRSAVSTAIVSSPVEVPPTKDANYYKSLIQQHGGEKQEKLPYSSNRQIQQPVTNYETAHNVRAKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGSAVSGIQSSKRMKMDNEISS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02451 430 ProSiteProfiles Zinc finger C3H1-type profile. 377 405 IPR000571 GO:0046872
Rops10g02451 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 263 426 - -
Rops10g02451 430 MobiDBLite consensus disorder prediction 409 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02451 Rops-Chr10 42848430 42853742 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Rops10g02451 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02451 - - gmx:100783321 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02451 10 42848430 42853742 Rops10g02451 10 42848430 42853742 ECH