Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02450 ATGGGGAAATCTACCTCCTGCTTCAAACTAATCACATGTGGCGGCGATGAGGCGGAGAAAGATGATTATCAAGTATCTGAGATCAAGGATTCTAATGATAAACGTGGTTGGAGTTTCCGCAAGAAATCTGCAAGGCACCGTGTGCTTAGCAATACCGTGATAGCAGAGGCCCCATCTTCTGTTAATAAGGAGAGTTCAGAATGTACTAATTTTAATTTTCAACCACTGCCTGAACCTAATGTTGTCGAGAAGATTTACACAACAAATTTCTCTGATGAGAAGCCACAGTTATCTTCCTTTCAAAGCTCACAAATTTCAGAAAGTAATATCATTGAAACTGAGAATGAGGTGGATGCAAATCCGCCAGAGGCCGCTGTTATCATCATCCAGGCTGGCATCAGAGGGTTAATGGCTCGGAGAGAACTTCTACATCTTAAGAGTGTAGTGAAGTTGCAAGCTGCTGTTCGTGGGCACTTAGTCCGGAGGCATGCTGTAGGAGCCCTACGTTGTGTTCAAGCCATCACCAAAATGCAGGTCCTTGTGCGAGCTCGTCGTGCTCAGCAGTCACGTCTGAAAAATCATGATTTAAATCTCAAGGATGGCAAAAATGAATCCTTAAAAGCTTTGGGGAATGAAAATCACATGACCAAACCCAATGTGACGTACACTTCCATTGAGAAGCTGCTTAGCAATAGTTTTGCTTGTCAGCTGTTGGAATCAATACCAAAGAACAAACGTATCCATTTCAAGTGTGATCCTTCTAAAGCTGATTCTGCTTGGAAATGGTTGGAGAGGTGGATGTCTGTATCATCAAAAGATGTTGCTGAGTTAAAAAATACTAGTTCTCTGACAGATCAATTGGACAAAAGTAAAGATAGCTCTTCCGAGTTTCAATTTGAAACAGGTATTCCATCTGAAGTTTTTCTCCAGCCTGCTGACTCAAAGCCCACTGTTGAGGATTCACCTCTGCTTTCTGAGGATGAAGAGAAGGTGATTACTTATGATGCTAGTAACTTCAAGTTTCAAGCAAGCTGTCCCACACCATCTATTGTAAAAGATGACTTGGAACAGGTTCCTCCTGAAGAGACTATTGCATATGATACTAAAATAGCCTCAGCAGAAACTGATTCCTGCAAAAAAGAAAAATCAGCATCAGATGCAAGTGCCCCATCAGAGCTTAATCTTAATTCTCTTCATAACAAGCCTGAAATTGATGGTGACCAGCACAAACGATCTCTAAAAAGATTCGCATCAGACCAACTAGAGGCTGAAGGAAAGAAACCTTTAAATGGATCAAGAAAGGTCAGTAATCCTGCATTTATAGCTGCACAGTCAAAATTTGAAGAGCTGAGTTCAGTGGCGAATTCAGGTAGGACAAGCAGTTTGTCCTATCAAGATGCAGCAGTTGAATCACAAGGAGACGCCTCTTCTGTTGGCACAGATACTGCATATAGATCGAAAGAGTTATCATCTGAAATTCCTGCTTCCTTTCTTTCTAGGGTTGGTGGTTCTGAATCTGGTACTGAACTTTCTATTTCTTCCACTCTTGATTCACCTGACGTGTCTGAGGTTGGCGCTATGGAGAATGAGCGAGATGCCAAAAATTTAGTTGAAGAGATTGGTCATTCTGAAAACACAATAAACCATGATGATGAGGCTAATGTTCCATGTGCCATTCCGGTGTCTAACTTGGCTACCACTGTGTTGGATCAGACAGAGATTGTTGATGACATCAGTGGCAATATGGTTCACTCAGTGGTAACTGTGGAATCTGAAGAGCCTGCTATTAAGACTGAAACCAATGTATCTGACCTGCAGAGAGAGCAGGTAGAGGCTGTTCGGCAGGATTTCAGATCATCTCCAGAAGCCTCACCTAGAAGCCATATAACTGTCCCTGAATCACAAGGAACACCTTCAAGTCAGGTATCTATGAAACCTAAAAAAAGCAAAATCAACAAGACTGGATCCGGCAATAAACGTGGAACCTTATTGGTGGGTAACAAGTCACCTGCAAATGCAAATCATGATTCCGGCTCAAGAGGCAATGGGGAGCAACTGCTGCCTAAAGATCAGCAGAGTGGGAAGAGACGCAATTCCTTTGGCTCAGTAAAACCTGATCACATTGATCAAGAACCCAGAGATAATAGTAGTAACAATAATTCTATTCCCCATTTCATGCAAGCCACAGAATCTGCTAGGGCCAAGATCAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTGCATGAACGAGACATTCAAGTTAAGAAGAGACATTCCTTACCTGCTGCCACTGGTAGGGAGGTTTCTCCACGTATCCAACGATCAATGTCTCAGGCACAGCAGAGTGCAAAGGGAAACAACAGTGTACATCCTCCTCAAGAGAGAAAGTGGGTGAGGTGA 2403 0.4266 MGKSTSCFKLITCGGDEAEKDDYQVSEIKDSNDKRGWSFRKKSARHRVLSNTVIAEAPSSVNKESSECTNFNFQPLPEPNVVEKIYTTNFSDEKPQLSSFQSSQISESNIIETENEVDANPPEAAVIIIQAGIRGLMARRELLHLKSVVKLQAAVRGHLVRRHAVGALRCVQAITKMQVLVRARRAQQSRLKNHDLNLKDGKNESLKALGNENHMTKPNVTYTSIEKLLSNSFACQLLESIPKNKRIHFKCDPSKADSAWKWLERWMSVSSKDVAELKNTSSLTDQLDKSKDSSSEFQFETGIPSEVFLQPADSKPTVEDSPLLSEDEEKVITYDASNFKFQASCPTPSIVKDDLEQVPPEETIAYDTKIASAETDSCKKEKSASDASAPSELNLNSLHNKPEIDGDQHKRSLKRFASDQLEAEGKKPLNGSRKVSNPAFIAAQSKFEELSSVANSGRTSSLSYQDAAVESQGDASSVGTDTAYRSKELSSEIPASFLSRVGGSESGTELSISSTLDSPDVSEVGAMENERDAKNLVEEIGHSENTINHDDEANVPCAIPVSNLATTVLDQTEIVDDISGNMVHSVVTVESEEPAIKTETNVSDLQREQVEAVRQDFRSSPEASPRSHITVPESQGTPSSQVSMKPKKSKINKTGSGNKRGTLLVGNKSPANANHDSGSRGNGEQLLPKDQQSGKRRNSFGSVKPDHIDQEPRDNSSNNNSIPHFMQATESARAKINANNSPRSSPDVHERDIQVKKRHSLPAATGREVSPRIQRSMSQAQQSAKGNNSVHPPQERKWVR* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02450 800 MobiDBLite consensus disorder prediction 595 800 - -
Rops10g02450 800 ProSiteProfiles IQ motif profile. 144 173 IPR000048 GO:0005515
Rops10g02450 800 PANTHER IQ-DOMAIN 5-RELATED 1 769 - -
Rops10g02450 800 Pfam Protein of unknown function (DUF4005) 710 783 IPR025064 -
Rops10g02450 800 MobiDBLite consensus disorder prediction 745 763 - -
Rops10g02450 800 Gene3D - 122 171 - -
Rops10g02450 800 MobiDBLite consensus disorder prediction 620 699 - -
Rops10g02450 800 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Rops10g02450 800 MobiDBLite consensus disorder prediction 771 790 - -
Rops10g02450 800 SMART iq_5 121 143 IPR000048 GO:0005515
Rops10g02450 800 SMART iq_5 144 165 IPR000048 GO:0005515
Rops10g02450 800 Pfam IQ calmodulin-binding motif 146 163 IPR000048 GO:0005515
Rops10g02450 800 Pfam IQ calmodulin-binding motif 124 142 IPR000048 GO:0005515
Rops10g02450 800 MobiDBLite consensus disorder prediction 714 744 - -
Rops10g02450 800 MobiDBLite consensus disorder prediction 376 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02450 Rops-Chr10 42835815 42841732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02450 112 800 IQD Protein Family AT1G19870 37.714 1.41e-102 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02450 - - gmx:100799424 1182.55