Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02429 ATGATGGAAAATGAATGTTATTCTCTTCCTACAATGGATCTGCTACGATCGGAGCCTATGCAATTGGTTCATTTGATCATTCCAATCGAATCAGCGCATCGATCTATCTCGTACCTTGGCGATCTTGGCCTCTTCCAATTCAAAGATCTTAATGCAGATAAAAGTCCATTCCAACGGACCTATGCTTCTCAGATTAAAAGATGTGGAGAAATGGCACGTACGCTGCGGTTGTTTAAGGAACAAATGAAGAAGGCAGGTGTATCACCCTCAACACGGTCATCAGGATATGGTGGTATTGATCTGGAGAGTTTGGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTACTCGAAATTAATTCAAATAATGAGAAGTTGCAACACACTTATAGTGAGCTATTAGAGTATAAGCTTGTTCTAGAGAAGGTTGGTGAGTTTTTCTCCTCGGCACAAAATAGTGCTGTAGCTCACCAGAGACAGTGTGAAGTTCAAACAACTGTTGAAGGATCAATAGACAGCCCATTATTACTGGAACAGCAGGCGTCAACATATCCATTAAAGCAGGTTAAGCTGGGGTTTATCTGTGGTCTTGTTCCTAGAGAGAAATCAATTCCTTTCGAGAGAATTTTATTTCGTGCTACTAGGGGAAACGTGTTTCTCAAGCAGGCTGTGGTTGAACATCCTGTTCTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTGTTTGTTGTATTTTATTCTGGAGAGAGAGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGTAAATCGTTATCCTTTCTCAGATGACTTGAGCAAGCAGTTTCAGATGATAACAGAGGTGTCAGGAAGACTTGAAGAATTAAAGACAACCATTGATGCAGGATTGCTTCACTGGAGCACTCTGTTGCAGACAATTGGATATCAATTTGAGCATTGGAGCCTTGTGTTGAAGAAGGAAAAATCCATTTATCACACTTTAAATATGCTAAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAGTCAGATTCAAAATGTATTGCAGCGGGCAACTATGGACTGTAACTCTCCAGTCGGGGCGATTTTTCAGGTTTTACATACAAAGGAATCACCGCCTACCCATTTTTGCACAAACAAGTTTACTTCTTCTTTTCAAGAAATTGTAGACGCCTATGGAGTTGCCAAATACCAGGAAGCCAATCCCGGTGTATACACAATCATCACGTTTCCATTCCTTTTTGCTGTAATGTTTGGTGATTGGGGACATGGCATATGTTTATTACTGGCGACTTTGTATTTCATAATCAAAGAGAAAAAGTTTTCTGGCCAGAAACTTGGAGACATATTAGAAATGGCTTTTGGGGGACGCTATGTTATTATGATGATGGCACTCTTCTCAATCTACACCGGCTTGATATATAATGAATTCTTCTCCATTCCATTTGAACTATTTGGACCATCTGCCTATGGATGCCGTGATCCTTCATGCAGGGATGCTTCTACAACAGGTCTAATAAAAGTGCGTGGCACTTACCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGACTGAACTTCCATTTCTTAACTCCTTGAAAATGAAGATGTCAATTCTACTGGGAGTATCCCAGATGAATCTTGGAATCATATTAAGTTACTATAATGCAAAATACTTTGGAAACGACATAAATATCTGGTACCAGTTTGTTCCCCAGATGATATTCTTAAACAGCCTATTTGGCTACCTTTCACTCCTCATAATTGTAAAATGGTGCACTGGATCACAGGCTGACCTGTATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGCTGAAAACCAACTCTTTGGTGGCCAAAAATTCCTTCAACTTGTGTTACTACTGTTGGCACTCGTCGCTGTACCGTGGATGTTAGTACCAAAGCCCTTTCTCCTGAAGAAGCAACATCAAGAAAGGCATCGAGGTCAATCTTACGCTTTGCTCTACAGCGGGGAAGACCCTCTCGAATCAGAGTCACCTAGTATTCCCCGTGACCATGAGGAGTTTGAGTTCAGTGAGGTTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTCGGAGCTGTGTCTAATACGGCTTCATACCTACGTTTATGGGCCCTCAGTCTAGCTCATTCGGAGTTGTCAAGCGTTTTCTATGACAAAGTTCTACTTCTAGCCTGGGGGTTTAACAACACCATTGTTCTCATTGTTGGCATTATTGTTTTTATATGTGCAACTGTTGGTGTGTTACTGATCATGGAAAGTCTAAGTGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTATGAGGGAGATGGTTACAAGTTCCTCCCATTTTCATTTTCATTACTTACTGATGAGGATGAACTGTAG 2463 0.4044 MMENECYSLPTMDLLRSEPMQLVHLIIPIESAHRSISYLGDLGLFQFKDLNADKSPFQRTYASQIKRCGEMARTLRLFKEQMKKAGVSPSTRSSGYGGIDLESLEVKLAELEAELLEINSNNEKLQHTYSELLEYKLVLEKVGEFFSSAQNSAVAHQRQCEVQTTVEGSIDSPLLLEQQASTYPLKQVKLGFICGLVPREKSIPFERILFRATRGNVFLKQAVVEHPVLDPLSGEKVDKNVFVVFYSGERVKSKILKICDAFGVNRYPFSDDLSKQFQMITEVSGRLEELKTTIDAGLLHWSTLLQTIGYQFEHWSLVLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIQNVLQRATMDCNSPVGAIFQVLHTKESPPTHFCTNKFTSSFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIIKEKKFSGQKLGDILEMAFGGRYVIMMMALFSIYTGLIYNEFFSIPFELFGPSAYGCRDPSCRDASTTGLIKVRGTYPFGVDPKWHGTRTELPFLNSLKMKMSILLGVSQMNLGIILSYYNAKYFGNDINIWYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLAENQLFGGQKFLQLVLLLLALVAVPWMLVPKPFLLKKQHQERHRGQSYALLYSGEDPLESESPSIPRDHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTIVLIVGIIVFICATVGVLLIMESLSAFLHALRLHWVEFQNKFYEGDGYKFLPFSFSLLTDEDEL* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02429 820 Pfam V-type ATPase 116kDa subunit family 38 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Rops10g02429 820 PIRSF ATP6V0A1 10 820 IPR026028 GO:0000220|GO:0046961
Rops10g02429 820 PANTHER VACUOLAR PROTON ATPASES 14 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Rops10g02429 820 Coils Coil 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02429 Rops-Chr10 42522123 42529992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02429 12 819 Primary Pumps ATPases(2) AT4G39080 74.536 0.0 1246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02429 K02154 - gmx:100805813 1373.22