Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02426 ATGGCTGATTCAGGCTCAGCCTCTTCCAGGAGAATGTGGTGCTCCATCCCCGAACGATTTCAGCTGCATGCGGCCATGTTGGCCCTGCAGTTTGGCTATGCTGGGTTCCATGTAGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACCGAAATATTATTGCTCTTCTTTTACTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGACCTGCAATTACTTTAAACTTCCTCCTCCAGTTCTTTCTTCTGGCCCTTGTCGGGATTACAGCAAACCAAGGCTTCTACTTGCTTGGCCTGGACAACACATCCCCAACTTTTGCATCAGCAATACAAAACTCTGTCCCAGCAATTACATTTCTCATGGCAGCCGTACTCAGGATAGAGCAAGTGCGACTGAAGCGAAAGGATGGGATAGCAAAGGTGGCAGGAACCGCATTCTGTGTGGCTGGGGCAACCGTGATTACACTTTACAAGGGTCCAACTATATACAGCCCAGTTCCACCTCTAAACAGCAACAACAACAACGCAGCACAGTTATTTGAGTCACTCTCACTGGGAGATGCAAAGGGCAAGAACTGGACCCTTGGTTGCCTCTACCTCATAGGGCATTGCTTGTCGTGGTCTGGTTGGCTTGTGTTGCAAGCACCAGTCCTCAAGAAGTACCCAGCGCGCCTCTCTGTCACTTCCTATACTTGTTTCTTTGGACTCATCCAATTTCTTATTATTGCTTTGATCTTTGAAAGAGATACTCAAGCTTGGATTTTCCACTCTGGTGGAGAAGTTTTCACAATTTTATACGCGGGAGTGGTGGCATCTGGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCCATTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGCATTGATCGTTGTGGGACTGTACCTAGTCTTGTGGGGTAAAAGTGAAGAGAAGAAGTTTGCAATGGAGCAGCTTGCTATTACTTCCACTCCGGAGCATAGCAGCATCAGGTCCTCAAGCCATGCTAAAGCATCACTCACTCAGCCTCTTCTCCCTTCATCAACGGAAAGTGTCTGA 1167 0.4764 MADSGSASSRRMWCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAVLRIEQVRLKRKDGIAKVAGTAFCVAGATVITLYKGPTIYSPVPPLNSNNNNAAQLFESLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALIFERDTQAWIFHSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIVVGLYLVLWGKSEEKKFAMEQLAITSTPEHSSIRSSSHAKASLTQPLLPSSTESV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02426 388 Pfam EamA-like transporter family 203 341 IPR000620 GO:0016020
Rops10g02426 388 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Rops10g02426 388 MobiDBLite consensus disorder prediction 366 388 - -
Rops10g02426 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Rops10g02426 388 PANTHER WAT1-RELATED PROTEIN 24 356 IPR030184 GO:0016020|GO:0022857
Rops10g02426 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02426 Rops-Chr10 42462836 42466510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02426 1 388 Nodulin-like Gene Family AT1G75500 76.396 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02426 - - gmx:100798686 644.039