Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02406 ATGGCAACTCCTGTTGAGCCTCCAAATGGGATCAGGACCGAAGGAAAACACTATTATTCCATGTTGCAAACCCTGTTTGAGATTGACACAAAATACGTGCCCATCAAGCCTATTGGTAGAGGAGCATATGGAATTGTGTGCTCTTTTGAGAATAGGGAAACCAATGAAAAAGTTGCAATCAAGAAGATACCAAATGCCTTTGAGCATAGTGTTGATGCATTCAGAACTTTGCGTGAAATGAAACTTCTTCGCCACCTTCACCATGAAAACGTGATTGCTTTAAAAGACATCATGATGCCCAATCATAGAAATAATTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACAGATTTACATCAGATTATAAAGTCTTCTCAACCACTGTCTAATGAACACTATCAATATTTCCTCTTTCAGCTGCTGAGTGGCTTGAAATATCTTCACTCATCTAACATCCTTCATCGTGACTTGAAACCTGCGAATCTTCTAATAAATGCAAATTGTGACCTAAAAATATGTGACTTTGGGTTAGCACGAAGCAAGAGCCAGTTCATGACCGAGTATATGGTCACTCGGTGGTATAGGGCACCAGAGATTCTACTAAGCTGTGACAAATATGGGACATCTATTGATATATGGTCAGTAGGATGCATCTTTGCAGAGCTTCTTGGAAGACAACCTATTTTCCCTGGTTCAGAGTCTCTCCACCAGCTACAACTGATTGTGAACATCCTTGGTAGTCAAAGGGAGGAGGATATGGAATTTGTTGATAATCCAAGGGCAAAGAATTATATCAAATCACTTCCATATTGTCCTGGAATCCACTTTTCCAGACTTTACCCCCATGCTCATCCATATGCAATTGATCTACTGACAAAGATGCTTGCTTTTGATCCATCAAAGAGGATTAGTGTCACTGAAGCACTGCAACACCCTTACATGGCTCCTCTGTATGATCCTGAGTGTGACCCTCATCCAGCCATCATTCCGGTTGATCTTCACATTGATGAGGATCCAGGGGAAGAGATGATAAGGGAGATGATGTGGCAGGAAATGCTTCATTACCATCCTGAAGCTGATGTGCAAAAACATGCATAG 1104 0.4112 MATPVEPPNGIRTEGKHYYSMLQTLFEIDTKYVPIKPIGRGAYGIVCSFENRETNEKVAIKKIPNAFEHSVDAFRTLREMKLLRHLHHENVIALKDIMMPNHRNNFKDVYLVYELMDTDLHQIIKSSQPLSNEHYQYFLFQLLSGLKYLHSSNILHRDLKPANLLINANCDLKICDFGLARSKSQFMTEYMVTRWYRAPEILLSCDKYGTSIDIWSVGCIFAELLGRQPIFPGSESLHQLQLIVNILGSQREEDMEFVDNPRAKNYIKSLPYCPGIHFSRLYPHAHPYAIDLLTKMLAFDPSKRISVTEALQHPYMAPLYDPECDPHPAIIPVDLHIDEDPGEEMIREMMWQEMLHYHPEADVQKHA* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02406 367 Pfam Protein kinase domain 33 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02406 367 Gene3D Phosphorylase Kinase; domain 1 19 353 - -
Rops10g02406 367 FunFam Mitogen-activated protein kinase 116 343 - -
Rops10g02406 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 31 323 - -
Rops10g02406 367 ProSiteProfiles Protein kinase domain profile. 32 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02406 367 Gene3D Transferase(Phosphotransferase) domain 1 116 343 - -
Rops10g02406 367 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops10g02406 367 SUPERFAMILY Protein kinase-like (PK-like) 24 322 IPR011009 -
Rops10g02406 367 SMART serkin_6 32 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02406 367 FunFam Mitogen-activated protein kinase 18 126 - -
Rops10g02406 367 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Rops10g02406 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02406 Rops-Chr10 42219896 42221128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02406 1 361 MAP Kinase Gene Family AT1G10210 78.846 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops10g02406 Pkinase 3.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02406 K20535 - gmx:100798863 644.81