Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02405 ATGCCTAATCATTGTTCATTAAGATTGTTTGAGATTCTTCTTCTGAAATTGCACAGTTTCAAGGATAAAGTTTTGTTTTTCCATATAAAGGGAATGGCGACTCCTGTTGAGCCTCCAAATGGGATCAGAAATGAAGGGAAGCATTATTATACCATGTGGCAAACCCTGTTTGAGATTGATACAAAATACGTGCCCATCAAGCCTATTGGTAGAGGAGCATATGGAATTGTGTGCTCTTCTGTGAATAGAGAAACTAATGAAAAGGTTGCAATCAAGAAGATACAGAATGCCTTTGAGAATCGTGTGGATGCGCTCAGAACCTTGCGTGAACTCAAACTTCTTCGCCACCTTCACCATGAAAATGTGATTGCTTTGAAAGACATCATGATGCCTATTCATCGAAATAATTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTACATCAGATTATAAAGTCTTCTCAGGCGCTGTCTAATGATCACTGTCAATATTTCCTCTTTCAGCTGCTTAGGGGCTTGAAATATCTTCACTCAGCTAACATCCTTCATCGTGACTTGAAACCGGGGAATCTTCTAATCAATGCAAATTGTGACCTAAAAATATGTGATTTTGGGTTAGCACGCACTAACTGCAGCAAGAACCAGTTCATGACTGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAGCTCCTACTGTGTTGTGACAACTATGGAACATCTATTGATGTATGGTCAGTGGGATGCATCTTTGCAGAGCTTCTTGGACGAAAACCTATTTTCCCTGGTTCAGAGTGTCTCAACCAACTAAAACTGATTGTCAATATCCTTGGTAGTCAAAGGGAGGAAGATATTGCATTTATTGATAATCCTAAGGCAAAGAAGTATATTAAATCACTTCCATATTCTCCTGGAACCCCCTTTTCCCGACTCTATCCCAATGCTCATCCATTGGCAATTGATCTACTGGCAAAGATGCTTGTTTTCGATCCCTCAAAGAGGATTAGTGTAACTGAAGCGCTGCAACACCCTTACATGGCCCCTCTGTATGATCCTAAATCTGACCCTCCAGCCATCATTCCAATTGATCTTGACATTGATGAGGATCTAGGGGAAGACATGATAAGGGAGATGATGTGGAAGGAAATGCTTCATTACCATCCTGAAGCTGTTATGGAAAATGCGGGCTTGTGCTCATGA 1212 0.4101 MPNHCSLRLFEILLLKLHSFKDKVLFFHIKGMATPVEPPNGIRNEGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPIHRNNFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIVNILGSQREEDIAFIDNPKAKKYIKSLPYSPGTPFSRLYPNAHPLAIDLLAKMLVFDPSKRISVTEALQHPYMAPLYDPKSDPPAIIPIDLDIDEDLGEDMIREMMWKEMLHYHPEAVMENAGLCS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02405 403 SMART serkin_6 63 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02405 403 CDD STKc_TEY_MAPK 57 392 - -
Rops10g02405 403 ProSiteProfiles Protein kinase domain profile. 63 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02405 403 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Rops10g02405 403 Gene3D Phosphorylase Kinase; domain 1 50 386 - -
Rops10g02405 403 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 62 361 - -
Rops10g02405 403 ProSitePatterns Protein kinases ATP-binding region signature. 69 93 IPR017441 GO:0005524
Rops10g02405 403 FunFam Mitogen-activated protein kinase 147 376 - -
Rops10g02405 403 FunFam Mitogen-activated protein kinase 49 157 - -
Rops10g02405 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Rops10g02405 403 Gene3D Transferase(Phosphotransferase) domain 1 147 376 - -
Rops10g02405 403 ProSitePatterns MAP kinase signature. 98 201 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops10g02405 403 Pfam Protein kinase domain 64 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02405 Rops-Chr10 42213981 42217014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02405 32 401 MAP Kinase Gene Family AT1G10210 85.676 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops10g02405 Pkinase 2.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02405 K20535 - gmx:100798863 717.998