Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02403 ATGTCAAAATCTGTGGAACTACCTGATTGTATATATCCTAACCAACCAGTAACCATTATTCCCCCAAGTGGTCCAACACCAAAGCATTCTCTTTACCTCTCTAATCTTGATGACCAAAAGTTCCTCAGATTCTCCATTAAGTATTTGTACCTCTTCAAGAAATCTGTGAGCTTGGATGTGTTGAAGTGTTCTCTGTCAAGAGTTCTAGTAGATTATTACCCCTTAGCTGGGAGGTTGAGGACTACCTCTGTGGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGCTCTGTTTGCTGAGGCTTACATGGCTATCACTGCTGAAGAATTACTTGAACCTTCCAAGATTCCAAATAAGACCTGGAAGAAGTTCTTGTATAAGGAGGAAGCTCAAGGTTTCTTAGATGTTCCTCCTCTCATAGTTCAGATAACAAAGCTCCGTTGCGGGGGTATGATCCTGTGCACGGCAATCAACCACTGCCTATGTGACGGCATCGGCACATCTCAGTTTTTACACGCTTGGGCACAATTGACCACAACACCCGAAGCTGAATTGACCATCCTACCCTTCCATCGGCGACACGTGCTGAAGCCCAGAGACCCCCCAGTAGTAAAGTTCCGTCACGCGGGATACACCGGAACATACCCAACAACACCTCAAGTGGACCTCCACAAATTGATACAATCCCAACCCTTGGTTCCCACATCCTTCACCTTCAACCCCTCCCATGTCCTCAACCTTAAAAAACAGTGCTTGCCCTCACTGAAATGCACCACCTTTGAAGCAGTTGCAGCACACACGTGGCGCTCTTGGATTCGCTCACTGGACCTATCCTTACCCTCCAACCTCGTAGTGAAGCTCCTTTTCTCAGTTAACATTCGCACAACACTGAACCTATCAAAAGGGTATTATGGTAATGGATTCTTACTAGGATGCGCCGAAAGTACTATAAAGGACTTAGTGGAAGGTAACCTGCACCATAGTGTGAAGCTAGTGCAGGAAGCTAAGGAAACGTTGAATGATAAGGAGTATATAAAGTCAACGGTTGACTTGTTGGAGGACAAAACGATAAAAACAGATCTTTTCACTAGTTTGGTTATATCACAGTGGTCTAAACTGGGGTTGGAAGAATTGGATTTTGGAGAGGGGAACCCATTGCACATGGGTCCTTTAACTAGTGATGTTTATTGCTTGTTTTTACCGGTTATTGGTGATGCTAGTGCGGTGAGAGTGCTTGTTTCTGTGCCGGAGAGTATGGTGGAGAGTTTTCAGTATCATATGAAAGAAAGCTGGGAAAAGAAAATGGAAAATGGAGGTGTTAAGAATGGGTATCATACGCATGAAAATGGATTCTTATGA 1365 0.444 MSKSVELPDCIYPNQPVTIIPPSGPTPKHSLYLSNLDDQKFLRFSIKYLYLFKKSVSLDVLKCSLSRVLVDYYPLAGRLRTTSVDDHKLEVDCNGEGALFAEAYMAITAEELLEPSKIPNKTWKKFLYKEEAQGFLDVPPLIVQITKLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTTTPEAELTILPFHRRHVLKPRDPPVVKFRHAGYTGTYPTTPQVDLHKLIQSQPLVPTSFTFNPSHVLNLKKQCLPSLKCTTFEAVAAHTWRSWIRSLDLSLPSNLVVKLLFSVNIRTTLNLSKGYYGNGFLLGCAESTIKDLVEGNLHHSVKLVQEAKETLNDKEYIKSTVDLLEDKTIKTDLFTSLVISQWSKLGLEELDFGEGNPLHMGPLTSDVYCLFLPVIGDASAVRVLVSVPESMVESFQYHMKESWEKKMENGGVKNGYHTHENGFL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02403 454 Gene3D - 15 215 IPR023213 -
Rops10g02403 454 Gene3D - 224 429 IPR023213 -
Rops10g02403 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 427 - -
Rops10g02403 454 Pfam Transferase family 18 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02403 Rops-Chr10 42195784 42198397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02403 18 392 Monolignol Biosynthesis Gene Families AT5G48930 27.411 8.52e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02403 - - gmx:100810619 714.146