Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02385 ATGTTTAGCTTGTGGGTTAAGATTAATTCTTTTTCTGCTATTATTAGTGTTGGGGAGCCTTGGATGATGGAGGATAATACAACACAAATTGCAGAAAAAGTGAATGATAACATAAAGTGCATTGGAAGTTATGAGAATAATGCCATAAAAGATGCTAATTTAGAAAGAAGTGTTAGGAATGTTAATTTAGAGAATGCTTCACCACATGCTTCTAATGGTCATAAGCATAATAGCCTCTATCCTCGTATTGGATTGGAATTTGACTCTCTTGATGATGTTAAAATTTTTTACAAAGCATTTGCTAAGGATGAGGGTTTTGGAATTCGTACCCGTTCAAGTAAACAAAATTTATGTATACTTGTGTGTTCTAATGCCGGTCAGCATACAATCAATAGTGGTAGTAATGAAGAAAGCAACACTGCCACTGGAAAAGCTAAGAAAATGTGCTCAACTTCAAGAACTGATTGTAAGGCATTACTTGTTGTTTCAAAAGCATGGAAGAGACATAAATGGGCTATTATTAGTTTTAACAATGTTCATAATCATGATATGCTTGGAGATCGTTCACAGTTGTTTGTCCATGTGCTTTTGAACCTTTTCAATCTGCTTGGAGATGTTGCTTCTGCTAGAAAGTTGGTTTCTGTGAATGATGAGTTGAATTATTTTGAAGATGCCATGCCTCTGGAAGTTATTGGGATTTAA 702 0.3476 MFSLWVKINSFSAIISVGEPWMMEDNTTQIAEKVNDNIKCIGSYENNAIKDANLERSVRNVNLENASPHASNGHKHNSLYPRIGLEFDSLDDVKIFYKAFAKDEGFGIRTRSSKQNLCILVCSNAGQHTINSGSNEESNTATGKAKKMCSTSRTDCKALLVVSKAWKRHKWAIISFNNVHNHDMLGDRSQLFVHVLLNLFNLLGDVASARKLVSVNDELNYFEDAMPLEVIGI* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02385 233 Pfam FAR1 DNA-binding domain 96 184 IPR004330 -
Rops10g02385 233 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02385 Rops-Chr10 41955876 41958973 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops10g02385 FAR1 3.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02385 - K17604 mtr:112420966 156.377