Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02378 ATGCAACACGAGTACGAGAATTATGATCCCTCCTTCCCTGACCAACCAGTGGTTGACCAATACCTCCCAGTTTGGGGCATGTTACCAGCCTTCCGGACCAAGCCAGCCTTCATTTGGGCTCAAGACTTGGACTCCTCCACTTCCCTCCTCACCTATCAACAGCTCAATACCTCTGTTCATGTCATCTCTTCTCAGCTACTCCTTTTACTACAAAGAGGTGACACCATCCTCCTCCTGTGCCCTCCAGGACTCAACCTTGTTGAGATCATCTTCGGGTGTCAAAGGGCTGGTCTTTTGAGTGTCCCTATCGTCCCTCCTCACCCTTCTTTTGCTAAAGAAGACTATCACCACTTCATAAGGGTGATTTCACAGACAAAGCCCAAAGCTGCCATAGCTCACCCTGATTACATATCAAGCATTAGACACTACGTGTCTTCCTCCCATCACAACAAGAAGCTTGCCCACATGTTACAAAGTATCCGCTGGATTTCCATTGATGAAGTCAAACATGGAAATAACTGTGGTTCCCTCTCATACAGTGGTTGCAAAGCAGATGAGGTTTATTTGGTTCAGTACACGTCAGGTGCCACTGGTATTCCAAAACCTGTACTTGTGACAGCCGGGTCAGCTGCTCACAATGTTAGGACAGCAAGGAAAGCTTATGATCTTCATCCAAACAGTACTATTGTTTCATGGCTGCCTCAATACCATGATTGTGGTCTCATGTTTCTGTTGCTGACTATTGTATCCGGTGCTACGTGTGTTCTCACGTCCCCAACTGCGTTCATCAAACGCCCAAGATTTTGGCTAGAATTGATGTCAGAATTCAAGGCCACATGCACTCCTGTTCCATCATTCACTTTGCCATTGGTGGTCAAGCGTGGAGGGATCGACAAAGGAACTTCACCCATAAATCTATCAACTTTGAAGAACCTTATAATCATCAATGAACCCATCTACAGAGATTCGGTGGAAGAATTTGTTCACTACTTTTCGCCATTTGGGTTAAGCCCCTCTTCTATCTCTCCTTCTTACGGGTTAGCAGAAAATTGTACCTTTGTTTCGACTGCATGGAGGGGTAACACCAATTCTAGCTTTCCATGTTTTCCAACTCACAACAAGCTGTTGCCAGTTGCAAGGTTATCCTCTAATGAGGGACATGAAGACGTGGAAATTATGGTTGTTAATGAAGAAACACATGAGCCAGCTGAGGATGGTGTAGAAGGAGAAATTTGGGTTTACTCACCAAGCAATGCCTCTGGCTACCTGGGCCACCCTTCTTTAACGAGGGAGGTGTTTCATGGAAGACTAAGAAACATGGTTCATAGGTGCTTTCTTCGAACAGGCGATAGAGGCATCGTCAAAGGAGAACATAGGTATCTCTTTGTCACTGGTCGCTGTCAAGATGTTATTGATCTCCAAAATGGTCAAAAAATTCATCCCCATTACATAGAGACTGCGGCTTATAACAGTAACCCAAAGTTACTAAGAGGTGGTTGCATTGCAGCCTTCAAAGTTTCAACAACAGTTGCACTTGTGGCAGAGATGCAAAGAGTGGAAAAAGATGCAGACATGGGGGTACTGAGCCTCTGTCAAGGGATCAAAGAAGCTGTTTTGAAGAAAGAGAATGTAGAGGTTGGATGGGTGGTTTTGGTTAAGAGTGAATGTGTTCCCAAAACCACTTCTGGAAAATTACAAAGATGGGCAGCTAAAGAGAAGCTTCTTGCAGGAAAAATGATAATTCTGATGGAGATGCGATTTGGAAAAGATGTCAGGAGAACACAAGAGGTAAGAAACAAGGATCAGATGAATGGTTCACTTTTATGTGCAGAAACTCGTAGCTCATTAATCTCACATCTGTAA 1863 0.4439 MQHEYENYDPSFPDQPVVDQYLPVWGMLPAFRTKPAFIWAQDLDSSTSLLTYQQLNTSVHVISSQLLLLLQRGDTILLLCPPGLNLVEIIFGCQRAGLLSVPIVPPHPSFAKEDYHHFIRVISQTKPKAAIAHPDYISSIRHYVSSSHHNKKLAHMLQSIRWISIDEVKHGNNCGSLSYSGCKADEVYLVQYTSGATGIPKPVLVTAGSAAHNVRTARKAYDLHPNSTIVSWLPQYHDCGLMFLLLTIVSGATCVLTSPTAFIKRPRFWLELMSEFKATCTPVPSFTLPLVVKRGGIDKGTSPINLSTLKNLIIINEPIYRDSVEEFVHYFSPFGLSPSSISPSYGLAENCTFVSTAWRGNTNSSFPCFPTHNKLLPVARLSSNEGHEDVEIMVVNEETHEPAEDGVEGEIWVYSPSNASGYLGHPSLTREVFHGRLRNMVHRCFLRTGDRGIVKGEHRYLFVTGRCQDVIDLQNGQKIHPHYIETAAYNSNPKLLRGGCIAAFKVSTTVALVAEMQRVEKDADMGVLSLCQGIKEAVLKKENVEVGWVVLVKSECVPKTTSGKLQRWAAKEKLLAGKMIILMEMRFGKDVRRTQEVRNKDQMNGSLLCAETRSSLISHL* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02378 620 CDD FAAL 30 576 IPR040097 GO:0008610
Rops10g02378 620 SUPERFAMILY Acetyl-CoA synthetase-like 30 576 - -
Rops10g02378 620 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 7 584 - -
Rops10g02378 620 Pfam AMP-binding enzyme 33 473 IPR000873 -
Rops10g02378 620 Gene3D - 11 467 IPR042099 -
Rops10g02378 620 Gene3D - 469 584 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02378 Rops-Chr10 41914230 41916092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02378 182 574 Monolignol Biosynthesis Gene Families AT4G19010 25.428 1.16e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02378 - - gmx:102666455 994.956