Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02366 ATGGCTAAACGCTTCAAGCTGAAATTCACAATCCCTTCATTTCAAATGTGTCGTTCAAAAAACCTTTCCACTTTCCCAGGAAACCCAGTTCCTGCCATATACCGTCTTTCTCCAGTAAACCCTAAAGCACATGATATAGGCTATCCAAATCCAAACCTACATGCTCCCTCACCCTCATCACCTGAACACCACTGCAAGAAGTCCTCAAAGATCATGTCCATCGCTCATGGATGCCAAATGTGCCTTGATAAGAAGAATAAGGTGAAATCCCGACGCAGAAAATGTACATCAAGCGTGCCATCAAGGAAGAGTGATTTTCTAATTGATAGCATGAATGAAGAAGAAAGTGAAACTCTTATTTCTTGCTCCACAAGTTTCTCCGACGAGATTGTCCCGAACCATAAACCAGAGAAAGAATTAATAAGCAGAAATAGAAAGAAGATAAGCAGTGTAAAAATGTCTCAGAGAGTGAGGTTTCACACTTTGGAGAATCGAAGAGGACCAGAAATGGTGCAGGTGAAGAAAACGACCATGTTGTCAAGGGCATCATCAATGACACGGAGCAATATGGAGGGGAAGGTGAATGAGAGTTTTGCGGTGGTGAAAAAGTCAAAGGATCCGTATGAAGACTTCAAGAAATCGATGCTGGAGATGATAACTGAGATGGAGATTTCTGAGGCTGAGGATTTGGAGCAACTCTTGCAGTGTTTCTTGGCTTTGAATTCTAGGAGTTATCATGCAGTAATTGTGAGAGCTTTCATGGAGATTTGGCAACTGATGTTTGTTTGGAACCCTATTTCCATCAAAAATCTCCAAGCAGACGTCAAAACTGATATGCAAAAGTAG 846 0.4161 MAKRFKLKFTIPSFQMCRSKNLSTFPGNPVPAIYRLSPVNPKAHDIGYPNPNLHAPSPSSPEHHCKKSSKIMSIAHGCQMCLDKKNKVKSRRRKCTSSVPSRKSDFLIDSMNEEESETLISCSTSFSDEIVPNHKPEKELISRNRKKISSVKMSQRVRFHTLENRRGPEMVQVKKTTMLSRASSMTRSNMEGKVNESFAVVKKSKDPYEDFKKSMLEMITEMEISEAEDLEQLLQCFLALNSRSYHAVIVRAFMEIWQLMFVWNPISIKNLQADVKTDMQK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02366 281 NCBIfam uncharacterized plant-specific domain TIGR01568 198 258 IPR006458 -
Rops10g02366 281 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 70 260 IPR038933 GO:0045892
Rops10g02366 281 ProSiteProfiles OVATE domain profile. 200 259 IPR006458 -
Rops10g02366 281 Pfam Transcriptional repressor, ovate 204 259 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02366 Rops-Chr10 41740399 41741244 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops10g02366 Ovate 4.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02366 - - gmx:102662518 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02366 10 41740399 41741244 Rops10g02366 10 41740399 41741244 ECH