Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02341 ATGGCATCATTCACCTGTGTTTCTTCTTCTCTTTTCCTCCAACTAGAATTTCCATTAAAGACCAGACCCTGCAAGTTTTCCTCCAATTTTCCTTTGACTTCATTTTCTGTTCATCCAATCAAAGCTTCGGTTTCAGAATCGGAGACAACACCATTGTCAGAAACCAACAAGCTTCCAATGCGTAAAATCCCTGGAGATTATGGTATCCCCTTTATAGGACCCATCAAAGACCGTCTCGATTATTTCTACAACCAAGGCCGCGACAAGTACTTTCGATCCCGCGTGCACAAGTACAACTCAACCGTGTTCCGCGCCAACATGCCACCTGGACCTTTCGTTTCCTCCAACCCAAACGTCGTCGTCTTGCTCGACGGAAAAAGCTTCCCTGTCCTCTTCGACGTCACCAAGGTGGAGAAAAGAGACGTCTTCACCGGCACTTTCATGCCTTCCACGGAACTCACCGGCGGCTACCGAATCCTGTCCTATCTCGATCCCTCCGAGGAAAAACATGACCAACTCAAGCGTCTCGTGTTCTTCCTCCTCAAGTCTCGTAGCAGCCACTTCATCCCCGAGTTTCGTTCAAGCTACACAAACCTCTTCGACACCTTGGAGAACGAGCTCGCTGACAAAGGAAAAGCAAGTTTCGCAGATGCACATGATCAAGCAGCATTTAACTTCCTAGCTCGCTCTTTTTATGGGACAAACCCCTCTGACACAAACCTCGGACTTGATGGTCCTAAAATAGTTCAAACATGGGTGCTTTTCCAACTTGGTCCTATTCTTCCCTTGGGCCTCCCGAAGCTTCTGGAAGATTCTATCTTCCACAGCTTTCGTCTCCCTCCTTTTCTGATAAAGAAAGATTACCAGAGACTATATGACTTCTTCTACGAGTCATCTGGGTCGGTGCTCGATGAAGCGGTGCGTCTTGGTGTCTCAAAAGAAGAAGCTTGTCACAACCTTTTATTCGCCACGTGCTTTAATTCATTTGGTGGCATGAAGATTTTCTTTCCAAACATGTTGAAATGGGTTGGACGTGCGGGTGTGAAACTTCACGCCCATTTAGCGGAGGAGATAAGGTCCGCTGTTGAATCTAACGGTGGGAAAGTGACGATGGCGGCGATGGAGATGATGCCGTTGATGAAATCGGTGGTTTATGAAGCGTTTCGAATTGAACCACCGGTGCCATTGCAATATGGGAAAGCTAAGCATGACATGGTGATAGAGAGTCATGAGAACGCGTTTCAAGTGAAAGAAGGGGAGATGCTGTTTGGGTTCCAACCTTTTGCGACTAAGGATCCGAAAATATTCGAGAGAGCGGAGGAGTTTGTTGGGGATAGGTTCTTGGGTGAGGGGGAGAAGCTGTTGAAGCACGTTCTTTGGTCCAATGGTTTTGAGACGGAGGAACCTAGCGTGAGTAACAAGCAATGTCCTGGTAAAGATTTCGTGGTTTTGGTTTCAAGACTCTTTCTTGTGGAGCTGTTTCTCCGTTACGATACCTTTGATATCCAAGTGGGAGCGTCGCCGTTGGGTTCTGCTGTTACTTTCACCTCACTCAAGAGGGCAAGCTTTTAG 1572 0.4733 MASFTCVSSSLFLQLEFPLKTRPCKFSSNFPLTSFSVHPIKASVSESETTPLSETNKLPMRKIPGDYGIPFIGPIKDRLDYFYNQGRDKYFRSRVHKYNSTVFRANMPPGPFVSSNPNVVVLLDGKSFPVLFDVTKVEKRDVFTGTFMPSTELTGGYRILSYLDPSEEKHDQLKRLVFFLLKSRSSHFIPEFRSSYTNLFDTLENELADKGKASFADAHDQAAFNFLARSFYGTNPSDTNLGLDGPKIVQTWVLFQLGPILPLGLPKLLEDSIFHSFRLPPFLIKKDYQRLYDFFYESSGSVLDEAVRLGVSKEEACHNLLFATCFNSFGGMKIFFPNMLKWVGRAGVKLHAHLAEEIRSAVESNGGKVTMAAMEMMPLMKSVVYEAFRIEPPVPLQYGKAKHDMVIESHENAFQVKEGEMLFGFQPFATKDPKIFERAEEFVGDRFLGEGEKLLKHVLWSNGFETEEPSVSNKQCPGKDFVVLVSRLFLVELFLRYDTFDIQVGASPLGSAVTFTSLKRASF* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02341 523 Gene3D Cytochrome P450 54 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02341 523 Pfam Cytochrome P450 352 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02341 523 SUPERFAMILY Cytochrome P450 58 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02341 523 PRINTS E-class P450 group IV signature 377 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02341 523 PRINTS E-class P450 group IV signature 430 448 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02341 523 PRINTS E-class P450 group IV signature 476 494 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02341 523 PANTHER CYTOCHROME P450 26 58 497 - -
Rops10g02341 523 FunFam Allene oxide synthase, chloroplastic 58 523 - -
Rops10g02341 523 CDD CYP74 92 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02341 Rops-Chr10 41249564 41251325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02341 19 523 Cytochrome P450 AT5G42650 63.261 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02341 K01723 - gmx:100807192 814.298