Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02338 ATGATAACAGAAAACCAACTTCCGATCCTTTTAGTTTTAGGTGTATCAATCTTTCTTCCCATAATCACAGCCCAAGTTAACTACCGTGAATGTCACAAAACATGCGGTTCAGCCAAACCCTTCCCTTATCCATTTGGATTCTCCTCCGGCTGCGATATCCGCCTCAACTGCAACCACGACGGCGAAGTCTTCATCGGAGAATTCCCAGTACAATCTATAAACGCAGACAACATAATAGTAAACATCAAAGCCCAATGCAATCGTTCATTTGATAGCTTCCACCAACTCTTCAGTCACAAATACGCACCAACTTCAGGAAACGTGATACTCTTACAGAACTGTACTGAAAAACTTTTGCCCTGCACGATACCGGAGACTCTTCTGCAAACTCACTTTGAGTTTCAGGGTTGTGACCGCTACGGCAGAGACAATTTTAGTTGCTACTTAGAGAACAACACTATGGGTTTCGTGAGTGACCGAAATTTGGACCGAATTGGATGCAAGTACTTTATGTCTTCGATATCTTCAGATGATTCGAGAAACACTTCCGGTGAGGCAGTTTCCTTGGAGGTAGCTACAATTAAGCTTGGATGGTGGCTTCACGGAGATCAATGTCTCTGTTCTGAACATGCAAACTGTACCAAACTTGAATCTCCGCTTGATAGAAAACCCGGGTTCCGGTGTCGCTGCGACGAAGGCTTCGTCGGAGATGGATTTTTGGCCGGAACAGGCTGCCGGAAAGCAGCCTCATCAACATGCAACCCAGCAAAGTACATGTCCGGCCGATGTGGAGGATCAGCGAGATTTATTGTCTTAATTGGAGGATTCGTTTTTGGTGTTTCACTGATGGTTACTCTGGGTTCAATATGTTGCTTCTTTCGCCGGCGCTCCAAATTGAGAATGACAAAGAGCACAAAAAGGCGCTTTACCGAAGCTACTGGCAATTACAGCGTTCCTATCTATTCCTACAAAGACATTGAAAAAGCCACCAACAGCTTCTCAGAGAAACAAAGGCTAGGAACTGGGGCATATGGGACAGTTTACGCTGGAAAACTTTACAATGATGAATGGGTTGCCATCAAAAGGATAAAACATAGAGACAATGAGAGTATTGAACAAGTAATGAATGAGATCAAGCTTCTTTCCTCTGTGAGCCACTCCAATTTAGTGCGTTTGTTGGGTTGCTCCATTGAATATGGAGAACAAATCCTTGTGTACGAGTTCATGCCCAATGGAACACTAAGTCAGCATTTGCAAAGGGAGAGAGGGAATGGACTTTCATGGCACGTTAGACTCACAATTGCAGCTGAAACAGCACAAGCCTTAGCACATCTTCATTCAGCTATTAATCCCCCAATTTACCATAGAGATATAAAGTCAAGTAACATACTTTTGGACTACAATTTTGGATCCAAAGTGGCAGATTTTGGGCTTTCTAGAATTGGAATGACTGAAATATCCCACATTTCAACTGCCCCACAAGGGACCCCTGGCTATGTTGATCCACAGTACCATCAAGACTTTCACCTTTCTGATAAAAGTGATGTATATAGCTTTGGTGTTGTTCTTGTTGAGATCATAACAGGACTGAAAGCAGTGGACTTTTCTCGTCCTCATAGTGACGTAAATTTAGCTTCTCTTGCTGTAGACAGGATACGGAAAGGGCTATTGGATGAGATTATAGACCCATTCCTTGAGCCTGAAGTAAGCAATGATGCTTGGACCCTTTCTTCTGTACACAAGGTGGCTGAGTTGGCATTCAGATGCCTTGCATTTCACAGGGATATGAGGCCTTCTATGACAGAAGTTGCAACTGAGCTAGAGCAGCTAAGGTTGAGTAAGTGGACAACCTTTGGAGAAAACAATTGTACAGCTTCAACAGAGTTGTCCTTTTGTTCTTCCTCTTCCTCTAGTGAAAGTGAGAAACCGCTGAGCACCACAATGAAGAAGGTTGGGCCAAAGGGTAAAGGCCTTCTCAATCTGCAGACTGAGCCCATGACTTCAAATTCAATGGAAAGGCCCAAGAGTAGCTCACCGGTTTCGGTGCAAGACCCAGACTTGTGGTTGAGTGGACAGAGCTCTCCTTCATCAAATAGTTTTCCTAGCAAGTCATTTGGTTGA 2121 0.4389 MITENQLPILLVLGVSIFLPIITAQVNYRECHKTCGSAKPFPYPFGFSSGCDIRLNCNHDGEVFIGEFPVQSINADNIIVNIKAQCNRSFDSFHQLFSHKYAPTSGNVILLQNCTEKLLPCTIPETLLQTHFEFQGCDRYGRDNFSCYLENNTMGFVSDRNLDRIGCKYFMSSISSDDSRNTSGEAVSLEVATIKLGWWLHGDQCLCSEHANCTKLESPLDRKPGFRCRCDEGFVGDGFLAGTGCRKAASSTCNPAKYMSGRCGGSARFIVLIGGFVFGVSLMVTLGSICCFFRRRSKLRMTKSTKRRFTEATGNYSVPIYSYKDIEKATNSFSEKQRLGTGAYGTVYAGKLYNDEWVAIKRIKHRDNESIEQVMNEIKLLSSVSHSNLVRLLGCSIEYGEQILVYEFMPNGTLSQHLQRERGNGLSWHVRLTIAAETAQALAHLHSAINPPIYHRDIKSSNILLDYNFGSKVADFGLSRIGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKAVDFSRPHSDVNLASLAVDRIRKGLLDEIIDPFLEPEVSNDAWTLSSVHKVAELAFRCLAFHRDMRPSMTEVATELEQLRLSKWTTFGENNCTASTELSFCSSSSSSESEKPLSTTMKKVGPKGKGLLNLQTEPMTSNSMERPKSSSPVSVQDPDLWLSGQSSPSSNSFPSKSFG* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02338 706 FunFam Wall-associated receptor kinase-like 14 isoform A 205 240 - -
Rops10g02338 706 Gene3D Laminin 206 240 - -
Rops10g02338 706 Pfam Protein kinase domain 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02338 706 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 662 IPR044652 GO:0004672
Rops10g02338 706 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Rops10g02338 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Rops10g02338 706 MobiDBLite consensus disorder prediction 630 706 - -
Rops10g02338 706 ProSiteProfiles Protein kinase domain profile. 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02338 706 FunFam Wall-associated receptor kinase-like 20 409 620 - -
Rops10g02338 706 MobiDBLite consensus disorder prediction 661 706 - -
Rops10g02338 706 Gene3D Transferase(Phosphotransferase) domain 1 409 627 - -
Rops10g02338 706 MobiDBLite consensus disorder prediction 630 645 - -
Rops10g02338 706 Gene3D Phosphorylase Kinase; domain 1 294 408 - -
Rops10g02338 706 SMART serkin_6 333 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02338 706 SUPERFAMILY Protein kinase-like (PK-like) 310 608 IPR011009 -
Rops10g02338 706 FunFam Wall-associated receptor kinase-like 14 300 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02338 Rops-Chr10 41234222 41240073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02338 7 700 Receptor kinase-like Gene Family AT2G23450 51.278 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Rops10g02338 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02338 - - gmx:100777480 1053.89