Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02333 ATGAGGACTGCCGCTGGGATTGCTAAGTCGGTAGGCATTGTAGCATGTTTGGCTGGTGCAGCAACCCTTGCCTTTTATAAAGGTCCTCATTTGAAATTTCTAAGCCATCATCACCTTCTGAGTTACCATAAAAGCCAACAACATCAAGATCATGCACAATCTGGTAGATGGATAATGGGTTGCTTCCTCTTGCTCCTCTCCAACACGTTTTTTGGGCTATGGCTGGTCCTACAGGGTTTTGTTATAAAAAGCTACCCTTCAAAGCTGCTCTTCACAACTCTTCAGTGTTTCTTCAGCTCAATTCAGTCTTTAGTCATTGCCTTGGCCATAGAAAGGGACATTGAACAATGGAAGTTGGGTTGGAATATCAGGCTCCTTTCCGTAGTATACTGTGGAATTATGGTCACTGGTGTCACATATTACTTACAGGCATGGGTTATAGAGAAGAAAGGACCTGTGTTTCTAGCCATGTCAACGCCACTGGCACTGATTATTACAATCTGCTCCTCCATTATTATCTTGGGCGAGATAATAACTTTGGGAAGCATTTTAGGTGGGTTTGTATTGGTTCTAGGACTGTACAGCGTGTTGTGGGGAAAGAGCAAGGAGCAAATGCCTAAAGCATCGCAAGACTTGGAGCAGGAAGCTGATGATGAACTTCTTTCACATATTGCTCATGAACCTAAACAAACAAAATCAAGTGTTGTTCATCTAACTAAGAAAACATTGTCCGAAACTATGAGTAATCCAAGTGGAGGAACCAAGACGGCTGTTGCAGGATGTGTAAAAATGGATTCTCCTATGTTAACTCAATCATCCAATCCACTCTTAGGCTCACTCAAAGCTTCACAACAAAACAAGAAGCCAAAAGTTGAGAAATTATAG 885 0.4203 MRTAAGIAKSVGIVACLAGAATLAFYKGPHLKFLSHHHLLSYHKSQQHQDHAQSGRWIMGCFLLLLSNTFFGLWLVLQGFVIKSYPSKLLFTTLQCFFSSIQSLVIALAIERDIEQWKLGWNIRLLSVVYCGIMVTGVTYYLQAWVIEKKGPVFLAMSTPLALIITICSSIIILGEIITLGSILGGFVLVLGLYSVLWGKSKEQMPKASQDLEQEADDELLSHIAHEPKQTKSSVVHLTKKTLSETMSNPSGGTKTAVAGCVKMDSPMLTQSSNPLLGSLKASQQNKKPKVEKL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02333 294 MobiDBLite consensus disorder prediction 269 285 - -
Rops10g02333 294 SUPERFAMILY Multidrug resistance efflux transporter EmrE 117 202 - -
Rops10g02333 294 Pfam EamA-like transporter family 59 197 IPR000620 GO:0016020
Rops10g02333 294 MobiDBLite consensus disorder prediction 269 294 - -
Rops10g02333 294 PANTHER WAT1-RELATED PROTEIN 2 210 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02333 Rops-Chr10 41161491 41163850 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02333 1 131 Nodulin-like Gene Family AT5G64700 51.852 7.99e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02333 - - gmx:100804562 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02333 10 41161491 41163850 Rops10g02333 10 41161491 41163850 ECH