Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02330 ATGAATACCTGTGTGTTTGTCTTTTATAGACAACTGATTGGAACCGTTATTTTGGTCCCTATGGCCCTGATATTTGAACGAGTTACCCTGGCTCTGAATGTGCATGGTATTGCCCTTGCTTACACTTATGCCACGTTGGCTGCGGCAATTGTTAATGGCCTCCCCGTTTCTACATTCTTCTTTGCTGTTCTGCTCAGAATGGAGAAATTAAATATGAGGACAAAATCTGGAATTACAAAGATAGGAAGTGTATCACTGTGCATTGTTGGTGTAGTGACCCTGGCATTTTACAAGGGACCACAATTAAGAACTGAGCAGTATCTCCTATCTGGAGACCACAACAATCAACATGGTGAAGATCATGTTTCATCTGGCAAAAGATGGATAATGGGTTCTTTACTGTTGTTCTTAGCCATCAACTTATGGAGTTTTTGGCTTGTAATTCAGGGAACACTGGTGACTGGGGTCGTTTACTACCTGCAAGCTTGGTTGATTGAGAGGAGAGGACCAGTTTTCCCAGCAATGTGGAACCCATTGAGTTTTATAATTGCTTTGATAGGATCTATATTGCTCTTGGGCGAACCCCTATGTTTAGGGAGTGTTCTGGGAGGGATTCTTCTGGTTTTAAGTCTCTATAGTGTTCTGTGGGCAAAAAGCAAAGAAGGAATGGCTCATCAGAATTCTTTACCAGTTCAAGCACATAAAGAGTGTGCAGAGGTGAAAACAGAGGCCAGCACTAATGAACCACAGCAACACGTATAA 762 0.4226 MNTCVFVFYRQLIGTVILVPMALIFERVTLALNVHGIALAYTYATLAAAIVNGLPVSTFFFAVLLRMEKLNMRTKSGITKIGSVSLCIVGVVTLAFYKGPQLRTEQYLLSGDHNNQHGEDHVSSGKRWIMGSLLLFLAINLWSFWLVIQGTLVTGVVYYLQAWLIERRGPVFPAMWNPLSFIIALIGSILLLGEPLCLGSVLGGILLVLSLYSVLWAKSKEGMAHQNSLPVQAHKECAEVKTEASTNEPQQHV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02330 253 PANTHER WAT1-RELATED PROTEIN 149 225 IPR030184 GO:0016020|GO:0022857
Rops10g02330 253 SUPERFAMILY Multidrug resistance efflux transporter EmrE 133 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02330 Rops-Chr10 41134766 41139322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02330 1 247 Nodulin-like Gene Family AT1G44800 25.466 1.98e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02330 - - vum:124822595 232.261