Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g02329 | ATGAAGAGGTCCCTTCTCCTAAAAGACCTCTCGTTCTTCTCTCCTTCTTCATCATCACCAGCTCACGCGCTTCTTGTTCGTCTTCATCTCTCTCATATTTCATCATCATCATCTCCTCCTTCTCCTCCTCAGCCTTACTGGAAGCGTCAAGAAGAGGAGTCACGCAACGTTAGGGTTTGCGTTTGGTGGGATTTCGAGAATTGCAACGTCCCCATTGGCGTTAACGTTTTGAAGGTGGCCCCAGCAATCACGGACGCTGTGAGGGCAAACGGGATTAAGGGTCCAATTCATATAACCGCTTTTGGAAATGTCATGCAACTCTCCAAGGCCAACCAGGAAGCACTTTCTTACACCGGGATTCATCTCACCCACATTCCAAATGGTGGAAAGAATAGTGCCGATAGATCTCTTCTGGTTGATCTTATGTATTGGGTTTCTCAAAATCATCCACCTGCACATCTCTTTCTGATATCGGGTGATAGAGACTTTGCTGGCATGTTGCACCGGTTAAGAATGAATAACTACAATATCTTGCTTGCGACTCCAGGAAAGGCTGCTGATGCTCTCTGCAGTGCAGCAACTATAATGTGGCAGTGGTCATCGTTGCTTAAGGGAGAAGATCTTACTGGCAAACATTTCAATCATCCTCCTGATGGTCCATATGGTTCTTGGTATGGAAACTATAAGGTGCCTCTTGAAAATCCCTTCTCATCCGCAGAGCAGTCTACATCTTCACTAAATGTGGAGGTCTATGAGCCTTCCTCGGACTTAAAGATAGGCCCAGTTCCAAAGTCAGTTGCAAGGCAGGTTAGGCAGATACTGAATTCACATTCAAGTGGGATCCCCATCACAGATGTTCGGGCAGAGTTGGCAAAATGTGGTGTGCGTTTGGATAAAAACCTATATGGATATAAAAGATTTTCCCGCCTTCTATTATCAATTCCACACGTACAGCTTCGGCCTTTAGGTGATGGTAATTTTTGTGTATGTTTGATCCCCTCAAAATCCCCTGAACCTTCCAAGAGCAGTGCTGTGCCATCAACATCTGCTGTTGAGAATGAGGAGGGGGGCTATGAAACAACTCTGAAGCTAAATTGTGAGGGTAAAAATATGGATAGAGATGCAGATGAGGCTCCCTCAATGGCCTCATTGTATGAAAGGAGCATGGACGATGATTCAAAATCATTCCAACCGGTCCCTTCCCAAGGTAAAAATATTGGGGAATATATGGATGGTAAATCATCTTCCCTGGGTAGTGAGAAGGTTGGGGATGTGGCTAATGCACAGTTGTCGGAGATTCAACTGCCAACGAAGGACAATGAAGTTTCCAAAACTAAGACTAGTTCCTTAAAAATGAGATCTAAAAATTCGCATGTTAATGAAATTGTTAGGTCTGACGATGTAAGTCCCAAAATTCTGGAAAAATATACAATTTCAGGGAATGACTCTGCTGAGAATGATTACACTACAGCAGAAAGCAATGGTTTTGCAAATTATGAATCTGGAAAATTTAAAGCAAAGAACGAATCTATGAATCCAATTGAAAAAGAGGTTAATGAAGTTTATCACAGCCCAGATTCTTCACCAGTTGATGACTCTCCTGTGGCTGAGAAAAGACCTGATGGAAGTGCTGAAACTTATAGCAAAAGTCCAACCTTCTTTATCTGGATTAAAAGTTGGTGGCCATTTTGGAAAAGCAGTGCAAAGTATGATGATTCAACTGCTCATCAGAACAAGGTGGTTAGCCATTTTGAGGATCCCGCAAAATTATCTGAAGAGGATCAGACTGTTGGTCATTTTAAAGAGCCCAAATTATCAGAACTGGACCAGGATGTTAGTCATTCTGCAAGGCCTGAGTTATTTTCTAGTGGTTCCTTTTGGAGTGACCTGGAATGTTTTGTTTTCTCACCCAAAGGATCACTTCTTTTCTCCCATTCAAGAAGCAGGGAGGATATGGCAAATAAATTACAAAAGGACGGACCCCTGGTTCTTAGATCTCTCACTGAAAACGATATCTTTCAGTTGGTGGAATTATTAATAACAGAGAAAAAATGGTTGGAGGAGAGCCCCTCCCGAGCATTTCCTTTTAGGCTAACTCAACCAGTTCAGAAGAGATCATTGATGGGCCAATCTCACGGTGCAAATGGCTTGAGATCTCTTTTTCTAAGTAGAACATCACAGACACAGTCCAACTTGCAAAAATCATTTGAATATGATGTGGAGAAACACAATCATAGTGTTCATCATACTAGAGTCTCCACACCTACCCCTGAAACGAAACAAACTGAGAGGACTAGGAATGATATATTAGTAGACTGTCAGAAACTTGTGAGTGAGATATTGAGGGAACACCCAGAGGGATATAATATTGGTTCTTTTCGAAAACAATTTGTTGATAGGTATGGCTATCATCTTGATTTGCAGAAGCTTGGTTATCAAAAGTTGGCTTCCTTGTTACAAATAATGCCTGGAGTTAAATTAGAGTCCACTTATATTTATCCTTCTTCTCCTGCTGTTTGTGCTTCTGACGGGGAAACTTCTATGCCAAAAACTCAATTAACCAATGCTAGTCATGCAGTATCCAACTCAGATGATGAATTATCTGATTCAGCCCCAAAAGATGATAACATGGAAAGTCAATGGGAGGAATTAGGTCCTGTTTCTGTCGACAATTCCGACCAAAGTGATCTGGAATCAAAATTCGGTCAGAAAGCCAAAGAACTAGAAACATTGAAGCATCCTGATTATGAACCCATCGTCCCAGATTATGATTCTTCTGAATCTGAAGGAGATGATAGCTCTTGTTTAACTCAACCTGAAGAGCAAGGGAAGCCAAAATGTAATGAACAAGACAGTTCTTTTTGGCAAGCTCTAGATTCGTGGCACAGCAGCAAGGAAGGAGAGAACAGTGTCAAGAAGTCAGACAATGGTGACGTCTTGGGCATTTCTCTGGCTGATATTTTAAATTCACCCACTGAGTCGACCCGGGGTACCCCTTCTAAAATTCCTTCAGGGAATTACAGAGAGAAGCAAAGATATCAAAAGAACTATTCATTTGTGGCTGACCCAGACTTGCCTAACAAGGACAAGCTGATTGATGGGATATTAGATGGCTTCAAGAAAGTAGATGAGTCAAAGATGCAAAACTGA | 3150 | 0.419 | MKRSLLLKDLSFFSPSSSSPAHALLVRLHLSHISSSSSPPSPPQPYWKRQEEESRNVRVCVWWDFENCNVPIGVNVLKVAPAITDAVRANGIKGPIHITAFGNVMQLSKANQEALSYTGIHLTHIPNGGKNSADRSLLVDLMYWVSQNHPPAHLFLISGDRDFAGMLHRLRMNNYNILLATPGKAADALCSAATIMWQWSSLLKGEDLTGKHFNHPPDGPYGSWYGNYKVPLENPFSSAEQSTSSLNVEVYEPSSDLKIGPVPKSVARQVRQILNSHSSGIPITDVRAELAKCGVRLDKNLYGYKRFSRLLLSIPHVQLRPLGDGNFCVCLIPSKSPEPSKSSAVPSTSAVENEEGGYETTLKLNCEGKNMDRDADEAPSMASLYERSMDDDSKSFQPVPSQGKNIGEYMDGKSSSLGSEKVGDVANAQLSEIQLPTKDNEVSKTKTSSLKMRSKNSHVNEIVRSDDVSPKILEKYTISGNDSAENDYTTAESNGFANYESGKFKAKNESMNPIEKEVNEVYHSPDSSPVDDSPVAEKRPDGSAETYSKSPTFFIWIKSWWPFWKSSAKYDDSTAHQNKVVSHFEDPAKLSEEDQTVGHFKEPKLSELDQDVSHSARPELFSSGSFWSDLECFVFSPKGSLLFSHSRSREDMANKLQKDGPLVLRSLTENDIFQLVELLITEKKWLEESPSRAFPFRLTQPVQKRSLMGQSHGANGLRSLFLSRTSQTQSNLQKSFEYDVEKHNHSVHHTRVSTPTPETKQTERTRNDILVDCQKLVSEILREHPEGYNIGSFRKQFVDRYGYHLDLQKLGYQKLASLLQIMPGVKLESTYIYPSSPAVCASDGETSMPKTQLTNASHAVSNSDDELSDSAPKDDNMESQWEELGPVSVDNSDQSDLESKFGQKAKELETLKHPDYEPIVPDYDSSESEGDDSSCLTQPEEQGKPKCNEQDSSFWQALDSWHSSKEGENSVKKSDNGDVLGISLADILNSPTESTRGTPSKIPSGNYREKQRYQKNYSFVADPDLPNKDKLIDGILDGFKKVDESKMQN* | 1050 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 743 | 763 | - | - | |
Rops10g02329 | 1049 | Gene3D | - | 263 | 332 | IPR041966 | - | |
Rops10g02329 | 1049 | Pfam | NYN domain | 58 | 193 | IPR021139 | GO:0004540 | |
Rops10g02329 | 1049 | CDD | LOTUS | 772 | 825 | - | - | |
Rops10g02329 | 1049 | ProSiteProfiles | OST-type HTH domain profile. | 769 | 843 | IPR025605 | - | |
Rops10g02329 | 1049 | Gene3D | - | 49 | 201 | - | - | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 336 | 355 | - | - | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 841 | 879 | - | - | |
Rops10g02329 | 1049 | PANTHER | LIMKAIN B LKAP | 33 | 779 | IPR024768 | GO:0005777|GO:0010468 | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 336 | 357 | - | - | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 930 | 950 | - | - | |
Rops10g02329 | 1049 | Pfam | OST-HTH/LOTUS domain | 263 | 326 | IPR025605 | - | |
Rops10g02329 | 1049 | Pfam | OST-HTH/LOTUS domain | 774 | 828 | IPR025605 | - | |
Rops10g02329 | 1049 | CDD | LOTUS | 263 | 331 | - | - | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 907 | 950 | - | - | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 389 | 408 | - | - | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 841 | 866 | - | - | |
Rops10g02329 | 1049 | CDD | PIN_limkain_b1_N_like | 58 | 182 | - | - | |
Rops10g02329 | 1049 | Pfam | OST-HTH Associated domain | 647 | 691 | IPR025677 | - | |
Rops10g02329 | 1049 | Gene3D | - | 764 | 831 | IPR041966 | - | |
Rops10g02329 | 1049 | ProSiteProfiles | OST-type HTH domain profile. | 262 | 333 | IPR025605 | - | |
Rops10g02329 | 1049 | MobiDBLite | consensus disorder prediction | 522 | 546 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g02329 | Rops-Chr10 | 41127863 | 41132176 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g02329 | 58 | 205 | C2H2 Transcription Factor Family | AT5G61190 | 43.919 | 1.77e-35 | 144 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g02329 | - | - | tpra:123916554 | 1257.28 |