Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02310 ATGATGTCCCTTCACATTTGTTGGGCTGCATGGAGTAGACAGATGTGTGGGCCTAATTCTACATTATGTTTTGGGAGTAAGGGACTTCAGCTTTGGGCTATGGGCTGATTTGAGCTGAATATATCATATGGTGAGGTTGAGTTTCAGATTCAAGGCGTACAACAATTCGAAGCCTGCAAAATTGTTGACGGGCAACGCTATACAAGAAGACTGAATGAGAAGCAAATTACTGCTCTATTGAAAGTTACTTGCCAGAGACCTCATGATCTGGAAAATGACATTTTAAAGATTCTATTTAAGAGAAGTGCACTGCAACACTATCAAATACCATGTCTCTTACAGGATAAAGATTGCTTACTTTGGTACAAATTCTGTGTCAAGCCAGGAGATCGCAAAAATGGTTCCTGGGCCTCCTCCGAGGCAACAACCTCCTGTCCAGGATCCATATTAATTCCAAGTTTACAGCCTGATGTATTGCCCCCTGGAATTCTAAATTTATCATTATCTTCTAATATTTATAACTTGGGAACAGGAAAGGGAACATCAATTTTGGAGATGGTTAGAGTTTTTGAACATGCCTATGGAAAGGTGACAAGCTTCATATATACCTGGATTATACTCAACAAATATAGTCAGCACTTGCTTATGTTACATGCTAAAAATATTGTACACAGAGATCTTTTCTTGCAAAGGGACATTGAAGGAGAAAATATACTTGTAGATACTAATGGGCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAGCATATAACTGGGCAATCATGTCCATTATCATTCATGGGAAGCCCTTATTGGATGGCTCTAAAGGACATAAAGAACTCTAGTGGCTCCAACCTTGCTCTTCATATATGGAGTCTTGGATGCACAATTTTGGAAATGGCTGCAACTAAGCTTCCGTGGAGTGATGTGAAGTGGCTAGGAAACTCAACTAATTAA 957 0.3992 MMSLHICWAAWSRQMCGPNSTLCFGSKGLQLWAMG*FELNISYGEVEFQIQGVQQFEACKIVDGQRYTRRLNEKQITALLKVTCQRPHDLENDILKILFKRSALQHYQIPCLLQDKDCLLWYKFCVKPGDRKNGSWASSEATTSCPGSILIPSLQPDVLPPGILNLSLSSNIYNLGTGKGTSILEMVRVFEHAYGKVTSFIYTWIILNKYSQHLLMLHAKNIVHRDLFLQRDIEGENILVDTNGRVKLADFGMAKHITGQSCPLSFMGSPYWMALKDIKNSSGSNLALHIWSLGCTILEMAATKLPWSDVKWLGNSTN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02310 317 SUPERFAMILY PAZ domain 56 96 IPR036085 GO:0005515
Rops10g02310 317 SUPERFAMILY Protein kinase-like (PK-like) 195 311 IPR011009 -
Rops10g02310 317 Pfam Protein kinase domain 213 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02310 317 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 213 309 - -
Rops10g02310 317 Gene3D Transferase(Phosphotransferase) domain 1 181 315 - -
Rops10g02310 317 ProSiteProfiles Protein kinase domain profile. 36 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02310 Rops-Chr10 40902189 40909605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02310 179 307 MAP Kinase Kinase Kinase AT1G63700 59.690 6.30e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops10g02310 Pkinase 2.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02310 K20717 - gmx:100792783 149.828