Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02309 ATGTCATCAACGTCCCAAACTATTGTTAACCATAGTTTGTTTGAAGAACAAGATCAGATCCCTATGCAGATGGGGTTCATTCCTTTCCCTGCTAACCTAACCCTCCCTCCTTTGGTTTGCCATCAATCTTTGAAAGCCATCAGTGCAATAGCTCCTTCACTTTCGTGGGAAGCTGCTTCCACTGCAAATTTTGCAGAAACCCTACTCTCAAACGCTGCTCAGAAACCACGAGAAGATCTCACTTCTAGTTTGGGAGGTGGAGGAGGAGGAGGAGGAGGAAGAAACCTCCTTCCCTTGAACAGATCAAGAGTGAATTCATGGGAATGGGGAGAGGTAAATGATTGCTTGATGGGTAAAAGAAGTGGAGGAGATGACCATCATCTAGGAGTTTCTGTCATGAAGATAAAGAAAATGAAGGCAAGGAGGAACATGAGAGAGCCTAGGTTTTGCTTCCAGACTATGAGCGATGTTGATGTGTTGGATGATGGCTACAAGTGGAGAAAGTACGGACAGAAAGTGGTAAAGAACACACAACACCCGAGAAGCTACTACCGTTGCACCCAAGATAATTGTCAAGTAAAGAAACGCGTGGAGCGTTTGGCTGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGCGCACTCTCCATCAAATGAACTTGAAGACTCACAAACTCAACCTGAACTTAGTAATTTCTTGTGGTAA 714 0.4454 MSSTSQTIVNHSLFEEQDQIPMQMGFIPFPANLTLPPLVCHQSLKAISAIAPSLSWEAASTANFAETLLSNAAQKPREDLTSSLGGGGGGGGGRNLLPLNRSRVNSWEWGEVNDCLMGKRSGGDDHHLGVSVMKIKKMKARRNMREPRFCFQTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCQVKKRVERLAEDPRMVITTYEGRHAHSPSNELEDSQTQPELSNFLW* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02309 237 MobiDBLite consensus disorder prediction 222 237 - -
Rops10g02309 237 FunFam WRKY transcription factor 57 146 220 - -
Rops10g02309 237 MobiDBLite consensus disorder prediction 211 237 - -
Rops10g02309 237 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 125 221 IPR044810 GO:0003700
Rops10g02309 237 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02309 237 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02309 237 SUPERFAMILY WRKY DNA-binding domain 152 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g02309 237 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02309 237 Gene3D WRKY domain 146 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g02309 237 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02309 Rops-Chr10 40894396 40897507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02309 130 237 WRKY Transcription Factor Family AT4G39410 76.106 1.12e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops10g02309 WRKY 4.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02309 - - gmx:100127389 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02309 10 40894396 40897507 Rops10g02309 10 40894396 40897507 ECH