Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02280 ATGAATCCCCAACCCAAACCCAAGTTGTTGTTGTCTGTGCAGCTGGTTCTTGTTTTTGTTTCAGTTTGTTTGGGCTCACCACCGGAGCTCCGATCTCTACTTGAATTCAAGAAAGGCATAACCGAAGATCCGTTGGGTCGGGTTCGTGACTCATGGAAGCCCTCTTCCCTCGACGACACCACCGTCTGCCCTCACTCATGGGAAGGAATCCTCTGCGACAACCTCACCGGAAACGTCACCGGCATCGTCCTCAACAATCTCGGTCTCGCCGGAGAACTCAAGTTCCACACTCTGTTAGACCTCAAGATGCTGAAAAACCTAAGCCTCTCAGGGAACCACTTCACCGGAAGGTTACCCCCTTCATTTGGCACACTCACTTCTCTTCAACATTTGGATCTTTCTGACAATGACTTCTACGGTCCCATCCCTGCTCGGATCAGCGAACTTTGGGGACTCAATTCTCTCAATTTGTCACTCAACAAATTCAAGGGTGGTTTCCCTACTGGCCTCCCAAACCTTCAACAACTTAGGGTCCTTGATTTGCACTCTAACCAACTCTGGGCTGACATTGGGGACCTTCTTCCCACTCTCCGCAACGTTGAGTACCTTGATTTGAGTCTTAATCAGTTCTTTGGGGGGCTTTCTTTTTCGCTTCAGAATGTTTCTGCTTTGGCTAATACTGTTCATTTTTTCAACTTGAGTCATAACCACTTGAATGGTCCTTTCTTCCAAAACGATTCCATCAGTTTGTTTCGCAACTTGCAAGTTTTGGATTTGACTAATAACTTGATCAGGGGGGAGCTTCCTTCTTTGAACTCCCTGTCTGCACTGAAGGTTCTGCGTCTCTCCCATAATCTCTTGTTTGGGTCCGTACCGGAGGAATTGTTGCATGGTTCAGTGTCCTTGGAAGAGTTGGATCTCAGCGCCAATGGCTTCACTGGCTCAATTGCTGTAATCAACTCTACAACTTTAAATATTTTGAATCTTTCATCGAACGGTTTATCAGGATCTTTGCCAACATCTTTGAGGAGATGTACAGCCATAGACTTGAGCAGGAATATGTTGTCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCACATTGGAGGTTATTGTTTTGAGTTCCAACAAGCTGTCAGGATCCTTGCCTCCTAGTTTAGAGATCTATTCAAAATTGTCTGCCATTGACTTAAGTTTAAATGAGCTCAATGGATCCATTCCAGGTGGTTTGGTTACTTCATCATCACTGACAAGACTGAATCTTTCTGGAAATCAATTTACAGGACCACTTACTCTTCAAAGTTCACGGGCAAGTGAATTACTACTTATGCCTCCTTATCAGCCAATGGAATATCTTGATGTATCGAATAACTCCTTAGAAGGTGTCTTGCCTTCTGATATAGGTAGGATGGGTGGACTCAAAATGCTGAATCTGGCAAGGAATGGCTTCTCCGGACAGCTGCCAAATGAATTGAACAAACTTATTTATTTGGAGTACCTCGATTTGTCTAACAACAAATTTACTGGAAATATTCCTGATAAGCTTCCGTCCAGCTTAGCTGTATTTAATGTGTCCAATAATGATCTATCTGGTCGTGTTCCTGAAAATTTGCGGCATTTCCCTCATTCATCCTTTTACCCTGGAAATGAAAAGCTAATGTTACCATCTAATTCCCCTGAAACTTCTTCAGTGCCAGATAATATTCCTGATAAAGGTAAACATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATCCTTGCCTCTGTGGGTGCTGCTGTGATGATTGCTTTTGTTCTATTGGCTTATCATCGAACACAACTAAAAGAATTTCATGGAAGAAGTGGGTTTACCGGTCAAAATACTGGAAGAGATGTCAAGTTAGGAGCACTTACAAGGCCTTCCCTCTTCAAGTTCCATACAAATGTTCAACCCCCAACAACTTCGTTGAGCTTTTCAAATGATCACTTGTTGACTTCCAATTCGAGGTCACTCTCTGGACAGTCAGAGTTTGTGACTGAAATTTCTGAGCATGGCCTACCTGAAGGAATGGTAGCAACTAGTTCAGCTTCTGTAAATCCTAATTTGATGGATAACCCTCCAATGTCATCCGGAAGGAAGTCTTCTCCTGGTTCCCCACTGTCGTCATCACCCCGTTTTATAGAGGCATGTGAAAAGCCGGTGATGTTGGATGTTTACTCACCAGATCGTCTAGCTGGGGAACTGTTTTTCCTGGATTCTTCACTAGCATTCACTGCAGAAGAATTATCTCGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTGTACAAAGCTACTCTGGACAGTGGTCATATGTTGACTGTAAAATGGTTACGGGTGGGATTGGTCAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCTTTACGAGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCTGACTATATACATGGGGACAGCTTGGCCCTCCATCTCTATGAGACCACACCCCGGAGGCATTCACCATTATCATTCAGCCAGAGAATAAGAGTTGCTGTTGATGTCGCGAGATGTGTTCTATATCTTCATGATCGAGGGCTTCCCCATGGAAATCTAAAGCCAACAAACATTCTGTTATCAGGCCCTGATTTCAATGCTCGTCTCACTGACTATGGTCTGCACCGGCTCATGACGCCAGCTGGAATCGCAGAGCAGATACTGAATCTAGGAGCACTTGGATACCGTGCTCCAGAACTTGCTACTGCAACAAAACCAGTTCCATCCTTCAAGGCAGATGTGTATGCAATTGGTGTGATACTAATGGAAATATTAACAAGAAAAAGTGCAGGTGACATAATATCAGGGCAGTCAGGTGCTGTTGATCTCACAGATTGGGTTAGGCTGTGTGAGAGAGAAGGAAGGGTAATGGATTGTATTGACAGAGACATTGCAGGTGGTGAAGAATCCTCCAAAGAGATGGACCAACTGCTTGCAACTTCTCTCAAGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCTATATCGGTTTGA 3120 0.4391 MNPQPKPKLLLSVQLVLVFVSVCLGSPPELRSLLEFKKGITEDPLGRVRDSWKPSSLDDTTVCPHSWEGILCDNLTGNVTGIVLNNLGLAGELKFHTLLDLKMLKNLSLSGNHFTGRLPPSFGTLTSLQHLDLSDNDFYGPIPARISELWGLNSLNLSLNKFKGGFPTGLPNLQQLRVLDLHSNQLWADIGDLLPTLRNVEYLDLSLNQFFGGLSFSLQNVSALANTVHFFNLSHNHLNGPFFQNDSISLFRNLQVLDLTNNLIRGELPSLNSLSALKVLRLSHNLLFGSVPEELLHGSVSLEELDLSANGFTGSIAVINSTTLNILNLSSNGLSGSLPTSLRRCTAIDLSRNMLSGDISVIQNWEATLEVIVLSSNKLSGSLPPSLEIYSKLSAIDLSLNELNGSIPGGLVTSSSLTRLNLSGNQFTGPLTLQSSRASELLLMPPYQPMEYLDVSNNSLEGVLPSDIGRMGGLKMLNLARNGFSGQLPNELNKLIYLEYLDLSNNKFTGNIPDKLPSSLAVFNVSNNDLSGRVPENLRHFPHSSFYPGNEKLMLPSNSPETSSVPDNIPDKGKHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFHGRSGFTGQNTGRDVKLGALTRPSLFKFHTNVQPPTTSLSFSNDHLLTSNSRSLSGQSEFVTEISEHGLPEGMVATSSASVNPNLMDNPPMSSGRKSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLRAYYWGPREQERLLLADYIHGDSLALHLYETTPRRHSPLSFSQRIRVAVDVARCVLYLHDRGLPHGNLKPTNILLSGPDFNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELATATKPVPSFKADVYAIGVILMEILTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDQLLATSLKCILPVNERPNIRQVFDDLCSISV* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02280 1039 MobiDBLite consensus disorder prediction 687 717 - -
Rops10g02280 1039 Gene3D Ribonuclease Inhibitor 245 565 IPR032675 -
Rops10g02280 1039 Pfam Leucine Rich repeat 414 429 IPR001611 GO:0005515
Rops10g02280 1039 Gene3D Transferase(Phosphotransferase) domain 1 838 1039 - -
Rops10g02280 1039 ProSiteProfiles Protein kinase domain profile. 759 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02280 1039 MobiDBLite consensus disorder prediction 556 577 - -
Rops10g02280 1039 FunFam Leucine-rich repeat receptor-like protein kinase 744 836 - -
Rops10g02280 1039 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Rops10g02280 1039 Gene3D Phosphorylase Kinase; domain 1 740 836 - -
Rops10g02280 1039 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Rops10g02280 1039 Gene3D Ribonuclease Inhibitor 23 244 IPR032675 -
Rops10g02280 1039 SMART LRR_typ_2 125 149 IPR003591 -
Rops10g02280 1039 SMART LRR_typ_2 101 124 IPR003591 -
Rops10g02280 1039 SMART LRR_typ_2 173 197 IPR003591 -
Rops10g02280 1039 SMART LRR_typ_2 274 298 IPR003591 -
Rops10g02280 1039 SMART LRR_typ_2 495 519 IPR003591 -
Rops10g02280 1039 FunFam Nuclear pore complex protein NUP107 27 192 - -
Rops10g02280 1039 PANTHER OS07G0626500 PROTEIN 11 104 - -
Rops10g02280 1039 MobiDBLite consensus disorder prediction 687 719 - -
Rops10g02280 1039 Pfam Protein kinase domain 763 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02280 1039 SUPERFAMILY Protein kinase-like (PK-like) 762 1034 IPR011009 -
Rops10g02280 1039 SUPERFAMILY L domain-like 54 355 - -
Rops10g02280 1039 FunFam Leucine-rich repeat receptor protein kinase EMS1 445 537 - -
Rops10g02280 1039 FunFam Pollen receptor-like kinase 1 837 1039 - -
Rops10g02280 1039 SUPERFAMILY RNI-like 320 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02280 Rops-Chr10 40510615 40516114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02280 12 543 Receptor kinase-like Gene Family AT5G01890 33.034 8.58e-55 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops10g02280 Pkinase 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02280 - - gmx:100802768 1681.77