Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02278 ATGGCTTCGTTTTGTTCAAGATTAACAATCAGTTTAGCTCTGTTTGTCCTCATATTGGGGAGTGCTAATGCACAACTTTCTACAAACTTCTATTCCAGTTCTTGTCCAAAACTTCTTTCCACTGTGAAATCCACAGTACAATCCGCTATATCAAAGGAGTCCCGCATGGGTGCTTCTCTCCTCCGCTTGTTCTTCCACGATTGCTTTGTTAATGGATGTGATGGTTCAATTCTACTCGATGACACATCAAGCTTCACCGGAGAGAAGAACGCAAACCCCAACAGGAACTCTGCTCGTGGATACGAAGTGATTGACAACATCAAATCAGCCGTAGAGAAAGTGTGCCCAGGAATTGTGTCCTGTGCTGATATCCTTGCCATAACTGCCAAAGACTCTGTTGAGATCCTTGGAGGCCCCACTTGGAATGTTAAACTTGGAAGAAGAGATGCTAAGACTGCTAGCCAATCTGCTGCCAACAATGGTATCCCTCCACCCACTTCTAACCTCAACCAACTCATCTCAAGGTTCAGTGCTCTTGGACTTTCCACCAAGGACTTAGTTGCATTGTCTGGTGCTCACACCATTGGACAAGCAAGGTGCACCAATTTCAGAGCACGCATTTACAATGAGACAAACATAGATAGCTCCTTTGCTAGCACAAGGAAATCAAGCTGCCCCAGAGCATCAGGTTCAGGGGACAACAAGCTTGCACCCCTTGATCTTCAAACTCCAACCTCATTCGACAACAACTACTTCAAGAACCTTGTTCAGAAGAAGGGTCTCCTCCACTCTGATCAGCAACTATTCAATGGTGGGTCCACTGATTCCACAGTGCGTGGTTACAGCACTAGCCCAAGCTCATTTTCCTCTGATTTCGTCAGTGCCATGATCAAGATGGGAGACATTAGTCCTCTCACTGGCTCTAACGGAGAGGTCAGGAAGAATTGTAGAAGGGTCAACTAA 963 0.459 MASFCSRLTISLALFVLILGSANAQLSTNFYSSSCPKLLSTVKSTVQSAISKESRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGYEVIDNIKSAVEKVCPGIVSCADILAITAKDSVEILGGPTWNVKLGRRDAKTASQSAANNGIPPPTSNLNQLISRFSALGLSTKDLVALSGAHTIGQARCTNFRARIYNETNIDSSFASTRKSSCPRASGSGDNKLAPLDLQTPTSFDNNYFKNLVQKKGLLHSDQQLFNGGSTDSTVRGYSTSPSSFSSDFVSAMIKMGDISPLTGSNGEVRKNCRRVN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02278 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PANTHER PEROXIDASE 72-RELATED 23 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 Gene3D Peroxidase, domain 2 163 299 - -
Rops10g02278 320 Gene3D - 29 320 - -
Rops10g02278 320 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Rops10g02278 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Rops10g02278 320 FunFam Peroxidase 163 299 - -
Rops10g02278 320 MobiDBLite consensus disorder prediction 219 240 - -
Rops10g02278 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601|GO:0042744
Rops10g02278 320 FunFam Peroxidase 29 171 - -
Rops10g02278 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops10g02278 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02278 Rops-Chr10 40480170 40482156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02278 24 320 Peroxidase AT5G05340 78.114 2.38e-179 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02278 K00430 - gmx:100803637 572.007