Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02243 ATGGAAGAGGTAATGAATTCTATTATACGTGCTTGTGAATTAGCTAAAAACCTTGAATCAAACCTACCCAACATGGCCAACCAGCTTGATATGCTGTCCTTGTCCATTGATGAGATAGTCGAGGCACTGAGTGCTGCCAAAGGAAGGCTATTACAGAACCAAACATCAGGATCTTCATTTACTCAGATGCTGCTTCATGAAACGCAGCAGCCTCATATGGATGGAAGTGTAATGCAGGAATGGCTCGGGTCTAGTTATGCACACACAATGGATCCGTTGTTTCAAATGAGCACCACATCGTATGATATGAGGGGTTTGGTTGAAAGTAAGATGATGGGTGGGGTGGATTTCTCACAGCTAAGGTCTAGGGGTACCCTGCAGATTGGTGAAATGGGTGGGAGAATTAACGTGAGATCGAAGGTATCTGAAGGAGAGGTGCAGACAACCGAGGCTTCACCCTCACGACCACGACGAAGTACCATTGGCAGCAAGGAAGTTCACTTGGGGAAGAGAAAAATGATGGTTCATGAACCTCAGTTTGGAAACAAAGAGATGCCACCGGATGATGGCTTCACTTGGAGAAAATATGGCCAGAAACAGATACTTGGTTCCGAGTACCCAAGGAGTTACTACAGATGCACACACCAGAAATTATATGATTGCCAAGCCAAGAAACAAGTGCAGCGATATGATCGAAATCCAAGAATGTTTGAGGTAACATACAGAGGAGACCACACCTGCCACATGTCCTCCACGGCACCATCATCAGTTCAACCACAACAACTACAGTTGTCACCATCATCAGCTTCTGTTTCCGGCCGGTGGCTGTCGTCAATGAGCCTCGGCCTCCAGCAAGGTGGCGGTGGCAGTAGTGGCAGTGGTGGAGCCTCCGCCAATTCAAGATATGGTGCTGATTATCCTGTGGTGGGTATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGTGGTAACAGTATGGAATCTCTCTTCCCTCCTGCTGAAGATAAATGTGAACCCAAAGAGAAAGAAAGTTGA 1035 0.4686 MEEVMNSIIRACELAKNLESNLPNMANQLDMLSLSIDEIVEALSAAKGRLLQNQTSGSSFTQMLLHETQQPHMDGSVMQEWLGSSYAHTMDPLFQMSTTSYDMRGLVESKMMGGVDFSQLRSRGTLQIGEMGGRINVRSKVSEGEVQTTEASPSRPRRSTIGSKEVHLGKRKMMVHEPQFGNKEMPPDDGFTWRKYGQKQILGSEYPRSYYRCTHQKLYDCQAKKQVQRYDRNPRMFEVTYRGDHTCHMSSTAPSSVQPQQLQLSPSSASVSGRWLSSMSLGLQQGGGGSSGSGGASANSRYGADYPVVGMADAMFNSGSSSGNSMESLFPPAEDKCEPKEKES* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02243 344 Gene3D WRKY domain 175 250 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g02243 344 MobiDBLite consensus disorder prediction 248 269 - -
Rops10g02243 344 MobiDBLite consensus disorder prediction 141 159 - -
Rops10g02243 344 MobiDBLite consensus disorder prediction 313 344 - -
Rops10g02243 344 SUPERFAMILY WRKY DNA-binding domain 185 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g02243 344 MobiDBLite consensus disorder prediction 140 162 - -
Rops10g02243 344 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 260 IPR044810 GO:0003700
Rops10g02243 344 SMART WRKY_cls 187 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02243 344 ProSiteProfiles WRKY domain profile. 188 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02243 344 Pfam WRKY DNA -binding domain 188 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02243 Rops-Chr10 39979779 39982435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02243 1 331 WRKY Transcription Factor Family AT2G40740 34.783 9.04e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops10g02243 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02243 - - gsj:114410180 320.472