Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02242 ATGAGTATTCTTTTCCCTGCAAAGAGGAAGCGGGTCATCAGAGAACTCGTTCAGGGTCAACAGTATGCTACTCAGCTCAGGTTTCTGCTTCAGGATCCTGGTTCAGATGATGGGTCTCTCTCTGCTAAGGAACTGGTGGCCAATGTGCTGAGATCTCTCGCTGAGTCTCTTTCTGTGATGACTTCTGAAGAAGAAGGTTGTGGGGATGAGGTTGGCGAAGATGGGTCTCAGGTTGCAGCTTCTAGCAATGAAGATTCAAGTGAGAGTAGGAATCAAGTGTTGTTGGTCACCAAGGATCGGAGAGGTTCCTACAAAAGAAGAAAGACTGAACAGACACGGACCGTAGTCACCCAAACCACTGATGACAATCATTCATGGAGAAAGTACGGACAGAAGGGAATCCTGAATTCTCAATTCCCCAGGAGTTATTTCAGGTGCACTGGTAAGTATAACCAAGGTTGCCGGGCAACCAAACAGGTCCAACAGCTACAAGAGAATCCGGTCATGTACCAAATTACGTATATTGGCATTCACACATGCAAAGACACTCTCAAGTTTCCACAAACGGTCACATATTCTGATACTTGGGATTCATTTCTTGCGAATTCCCACCCTGACTCAAAGGTGCCAAATGAACAGGATCACCCTATTAGCTCACAAAGCCCAACTATAAAACAAGAATATCCCAACGAAGACACTCCTAGTGATCTTGCAGACAACTTGGATCCTAGCATGTGGTCTGATTTGAAGGATTTTGAACTATCCAAGCCTTCCATTATACCCTTAAATATGGTATCGGATAATGCAGATACTGTGTATTCATGTACTGGCTCTCAAAGTCTTGACATGGATTTCGGGGTATTTTCTTCTCATTTCAGCACCGGCTTCCACTTTGATGAAAGTCATTTGCTTTAG 915 0.4437 MSILFPAKRKRVIRELVQGQQYATQLRFLLQDPGSDDGSLSAKELVANVLRSLAESLSVMTSEEEGCGDEVGEDGSQVAASSNEDSSESRNQVLLVTKDRRGSYKRRKTEQTRTVVTQTTDDNHSWRKYGQKGILNSQFPRSYFRCTGKYNQGCRATKQVQQLQENPVMYQITYIGIHTCKDTLKFPQTVTYSDTWDSFLANSHPDSKVPNEQDHPISSQSPTIKQEYPNEDTPSDLADNLDPSMWSDLKDFELSKPSIIPLNMVSDNADTVYSCTGSQSLDMDFGVFSSHFSTGFHFDESHLL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02242 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 211 IPR044810 GO:0003700
Rops10g02242 304 MobiDBLite consensus disorder prediction 203 230 - -
Rops10g02242 304 SUPERFAMILY WRKY DNA-binding domain 117 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops10g02242 304 MobiDBLite consensus disorder prediction 203 237 - -
Rops10g02242 304 SMART WRKY_cls 120 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02242 304 MobiDBLite consensus disorder prediction 76 92 - -
Rops10g02242 304 Pfam WRKY DNA -binding domain 121 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02242 304 ProSiteProfiles WRKY domain profile. 115 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops10g02242 304 MobiDBLite consensus disorder prediction 62 92 - -
Rops10g02242 304 Gene3D WRKY domain 105 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02242 Rops-Chr10 39976458 39976964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02242 7 234 WRKY Transcription Factor Family AT3G56400 41.026 4.39e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops10g02242 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02242 - - gmx:100778162 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01372 9 22464146 22467381 Rops10g02242 10 39976458 39976964 PCT