Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02224 ATGGAGCCACTGACATTGTGGAAACTTCAGGCGCCTAAGGCTAGCCCCATTCCCGGATACTCCCGTCGTCGAAAAACAAAGGTATGGTACCGCAGCCCAACTAACGTTAGGGAGATCAGATTTACCAGAAGCACCACCGCGTGTGGCTCGGAACCTTCAAGGACGAAGACGAAGCAGCCAGAGCCTATGACATCGCCGCACAGAGGTCTATTGTACACTTACTCCACAGGGATGAAGCAACATCTATATGTGAACCAACCTGATCTAGTGAGAGAATTGAACCAATGTATTACTTTGGATTTGGGTAAGCCTTCTTATATAACAAACAAACTTGCACCTATGCTTGGCAATGGCATTTTGAGAGCCAATGGGCTTAGTTGGGCTCAACAGAGGAAACTTGTTGCAGCTGAGTTCTTCATGGACAAAGTTAAGGGTATGGTGGGGTTAATGATAGAGTCAGCGCAGCCATTACTACTAAAATGGGAGCAACTTGTTGAGGGCCAAGGAGGTGCCACAGCAGAAGTTAAAGTTGATGCAGATTTGAGGGGTTTCTCAGCTGATGTTATTTCAAGGGTCTGTTTTGGCCACTCTTATTCCAAAGGTAAGGAAGTTTTCTTAAAACTTAGAAGCATCCAGAAGGTCATGTCCAAGCAAGGTGGCTTCCTTTTTGGGCACAGTGGTTTCAGTGACAAACTAAAAGTCTGGACAAAGAAGCAAAACGAGATTACCAATTTGGAGAGAGAGATAGAGTCACTGATCTGGGAGTTAGTGGAGGAACGCAAGAGAGAATGCTCAGAGACATCCTCATCAGAAAAGGATCTGATGCAGTTACTGCTGGAAGCAGCCATGACTGATCAAAGTTTAGGGAAGGACTTTTCAAAGCGATTCATTGTGGATAATTGCAAAAACATATACTTTGCTGGCCATGAAACTACTGCTGTTGCAGCCTCTTGGTGTTTGATGCTTCTTGCTTTACACCCTGAATGGCAAACTCGTATAAGAACAGAGGTAGCTGAACATTGCCCCAATGGCATACCAGATGCTGATTCTCTCCCTCTCTTGAAAACGGTGACTATGGTGATTCAAGAAGTGCTACGTTTATATCCACCAGCTGCTTTTGTGTCAAGGGAAGCATATGAAGATATCCAAATTGGAAACCTTAATGTTCCTAAAGGTGTTTGTTTATGGACTCTGATTCCAACTTTGCATAGAGATCATGAAATCTGGGGACCAGATGCTAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGTGTCTCTAAGGCTTGCAAGTTTCCACAAGCATATGTGCCATTTGGATTGGGTACTCGCTTATGCTTGGGGAAGAACTTTGCAATGGTTGAGTTGAAGGTTGTGCTGGCCCTTATCATCTCCAAGTTCAGCTTCTCTTTATCTCCTAGTTATAGGCATTCTCCAGCATATAGAATGATTGTAGAGCCAGGACATGGTGTATACATTCTCATTCAGAAGATTTGA 1494 0.4404 MEPLTLWKLQAPKASPIPGYSRRRKTKVWYRSPTNVREIRFTRSTTACGSEPSRTKTKQPEPMTSPHRGLLYTYSTGMKQHLYVNQPDLVRELNQCITLDLGKPSYITNKLAPMLGNGILRANGLSWAQQRKLVAAEFFMDKVKGMVGLMIESAQPLLLKWEQLVEGQGGATAEVKVDADLRGFSADVISRVCFGHSYSKGKEVFLKLRSIQKVMSKQGGFLFGHSGFSDKLKVWTKKQNEITNLEREIESLIWELVEERKRECSETSSSEKDLMQLLLEAAMTDQSLGKDFSKRFIVDNCKNIYFAGHETTAVAASWCLMLLALHPEWQTRIRTEVAEHCPNGIPDADSLPLLKTVTMVIQEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLIPTLHRDHEIWGPDANEFKPERFSEGVSKACKFPQAYVPFGLGTRLCLGKNFAMVELKVVLALIISKFSFSLSPSYRHSPAYRMIVEPGHGVYILIQKI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02224 497 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 SUPERFAMILY Cytochrome P450 60 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Rops10g02224 497 MobiDBLite consensus disorder prediction 45 66 - -
Rops10g02224 497 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 Coils Coil 242 262 - -
Rops10g02224 497 Gene3D Cytochrome P450 62 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 Pfam Cytochrome P450 69 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops10g02224 497 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 489 - -
Rops10g02224 497 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02224 Rops-Chr10 39780931 39784522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02224 89 494 Cytochrome P450 AT5G24900 58.394 2.99e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02224 K20661 - gmx:100818766 798.119