Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02208 ATGTCCACCAAGCTCATCTCAGGAACAAGCCTTCAACTCTTAAGGCGTTTCGATCACCGATCAGAAAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCTGCTTATGTTCGTGTGTTTGTTCGTGTTTTGCGTGATATTTTCAAAGAAGACACTGTTGAGTATGTTTTGGCACTGATTGATGAAATGCTTACAGCAAACCCCAAAAGAACAAAACTGTTTCATGACAACACCCTTGCAGATGAAGATACTTATGAGCCTTTCCTAAGTTAA 273 0.4139 MSTKLISGTSLQLLRRFDHRSESHRAQLLDDDGPAYVRVFVRVLRDIFKEDTVEYVLALIDEMLTANPKRTKLFHDNTLADEDTYEPFLS* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02208 90 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 89 IPR004908 GO:0000221|GO:0046961|GO:1902600
Rops10g02208 90 Pfam V-ATPase subunit H 1 89 IPR004908 GO:0000221|GO:0046961|GO:1902600
Rops10g02208 90 SUPERFAMILY ARM repeat 2 89 IPR016024 -
Rops10g02208 90 Gene3D - 1 90 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02208 Rops-Chr10 39620230 39620754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02208 1 89 Primary Pumps ATPases(2) AT3G42050 73.034 1.80e-42 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02208 K02144 - lja:Lj4g3v0913490.1 169.088