Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02162 ATGAGCTTTCATCTTCACATTCCTCACCTCCACTTTCATCACCACCACCATGAAAAGAAGGATCTGAAGGACATCCCAAAAGGGTGTTTGGCAGTCTTGGTGGGTCAAGGGGAGGAGCAACAAAGGTTTGTGATCCCTGTGATTTACATTAACCACCCACTGTTCATGCAGTTGTTGAAAGAAGCTGAAGAAGAATTCGGGTTTGATCAGAAAGGCCCCATTACCATTCCTTGCCATGTGGAAGAGTTTCGCACCGTTCAAGGCATGATTGACAAGGAGAAATCTCACCACCACCACCACCATCATCACCAGGCTTGGTGCTTCAAAGTTTGA 333 0.4655 MSFHLHIPHLHFHHHHHEKKDLKDIPKGCLAVLVGQGEEQQRFVIPVIYINHPLFMQLLKEAEEEFGFDQKGPITIPCHVEEFRTVQGMIDKEKSHHHHHHHHQAWCFKV* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02162 110 Pfam Auxin responsive protein 20 88 IPR003676 GO:0009733
Rops10g02162 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02162 Rops-Chr10 38981456 38981788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02162 24 84 Calmodulin-binding Proteins AT5G20810 60.656 7.28e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02162 K14488 - qsu:111993973 178.718