Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02123 ATGGATTTCTTCACTGAACTTGATTTCCCCAACCTTGAGTTTCCTCATGACTTCAACTGGTTTTGCAATGCTCAACAAACCGACACAGACAAAATCATGGAGCTTTCGCCATTAGATGGTTTCTACGAGATTAATTGGGTTCCTCAGTTGCCATATCAAAGCAAGCAACTTTGCTTCAATGAATTTCCCGATCTTGAAAATTTCAACTTTGACTTCAATCTACCACCCCTTGATGAAAATTTTGATGTTGACCAAAAGCCCCTTAACATTGTTATGCCCGACCGGGGGAATTATTGCAATGGAGGAGAGAGTGGTTTTGGTGAAGCTTCGGTGAATATTGGAGGTGGGTTTGTGATTTCTTCTGTGAAGAAAGAGGAGGAGAAGGAGAATCAAGAGGTGCTAGTGTCATTGCCTAGTGGTAGCAAGAAGAGGTCAGGTGCATTGGAATTTGATGAGATAAAGAAGCATTTTGGGGTTCCCATAACTGTAGCTGCTAAAAAAATGAATGTGGGGTTGACCCTGTTGAAGAGAAGGTGCAGGGAACTCAACATCATGAGGTGGCCCCACCGCAAACTCAAGAGCTTGAAGTTACTCATCGACAATGTCAAGGAATTGGGTTTGGCAAACGAGGTTGCCATGTTGGAGAAGCACAAAAAGATGTTGGAGAGATTACCGGGAATGGAACTGAACGAAGAAACCAAGAAGCTGAGGCAGGCTTGTTTTAAAGCCAATTACAAGAGGAGAAGATATTTGGCCCTCCAAGCTTGA 768 0.4323 MDFFTELDFPNLEFPHDFNWFCNAQQTDTDKIMELSPLDGFYEINWVPQLPYQSKQLCFNEFPDLENFNFDFNLPPLDENFDVDQKPLNIVMPDRGNYCNGGESGFGEASVNIGGGFVISSVKKEEEKENQEVLVSLPSGSKKRSGALEFDEIKKHFGVPITVAAKKMNVGLTLLKRRCRELNIMRWPHRKLKSLKLLIDNVKELGLANEVAMLEKHKKMLERLPGMELNEETKKLRQACFKANYKRRRYLALQA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02123 255 PANTHER PROTEIN RKD4 114 250 IPR044607 GO:0003700
Rops10g02123 255 ProSiteProfiles RWP-RK domain profile. 131 216 IPR003035 -
Rops10g02123 255 Pfam RWP-RK domain 148 195 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02123 Rops-Chr10 38490119 38491430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02123 148 252 AtRKD Transcription Factor Family AT5G53040 61.905 2.08e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Rops10g02123 RWP-RK 3.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02123 - - aprc:113850801 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02123 10 38490119 38491430 Rops10g02123 10 38490119 38491430 ECH