Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02114 ATGGGGAAAAAAGGAGGTAGCTGGTTCTCTTCAGTGAAGAAAGTTTTCAAGTCTTCTTCTAAGGACTCGCCGGTGCCGGAAAACAAGAAGGACAATGAGGAGAAATGGCAGCACGAAGCACCAGAGGTGGTATCTTTTGAGCACTTTCCTCCAGATAGTTCACCAGATATCACCAATGAGGAGAGTGCCACATCAACACCAGTGACTGAAGATAGAAATCATGCCATTGCTTTTGCAGCTGCAACTGCTGCAGCTGCTGAAGCTGCAGTGGCAGCTGCTCAAGCAGCTGCTAGAGTTGTGAGAATGGCAGGTTATGGACGCCACTCCAAAGAAGAAAGGGCAGCAACACTCATTCAATCATACTATAGAGGCTACCTTGCTCGACGTGCACTACGTGCTTTGAAGGGATTAGTGAGGCTGCAAGCACTTGTGAGGGGACATAATGTGCGCAAGCAAGCACAGATGACAATGAGATGCATGCAAGCATTAGTCCGAGTACAAGCAAGAGTGAGAGCTCGTAGACTCCAATTAACTCGTGAGAAGCTTCGTGGGACAATGGAGGAACATAAACAAAAAGAACTCTTACTAGAGGAACCGGATCCTAAGCTAATTATGAGCCCCATTACAAAGTTAGACATGGATGGTTGGGACAACAGGCGTCAAAGTAGCCAAAAAATTAAGGATAGTGATTTAAGGAAACATGAAGCTGCAATGAAAAGGGAGAGAGCTCTTGCATACGCTTACAACTATCAGCAACAACAGAAGCAATATTTGCATATAGACCCAAGTGGTGATGATATTGAAAGCTATGTCAATGAGCATGAACAAGCCCGATTGGATTGGAACTGGTTAGAACGTTGGATGTCCACACAATCACATCAAGTTAGGTACTTGGGGACACGTGAGACCCCATACATGACCACAGATGAAGAAAAGACAGTTGAAATGGACATGGTTGCATCTCAAGACTCAACTCACACCAACATGGGCCTTATGAACCAAGACTTTCTTTCAAGCCCAATCTCCAATAGGCTCCACAAGAGACAGCACAGTGCAGGTGTACCTAGCTATATGGCCCCAACCCAGTCTGCACAGGCCAAGGTTAGAGGTCAGGGCCCATTTAAGCAACGGGGTTCATCTGGGCCTCAGTGGAACCCATCCATAAGGGGTTCTGCTGTTGGGCTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCATTGCAACTCATCCTTTTCCTAGAAGCCCAAACCCAAAAATTAATGGGATTAGACTCCAATCTAGACGGATTTCAAGCAGCAGCCCAGATAATGTTGGTGTTGAAGATTGGGCCATTGCTCTTGGGGCCCACGGTTGGGTATGA 1359 0.4695 MGKKGGSWFSSVKKVFKSSSKDSPVPENKKDNEEKWQHEAPEVVSFEHFPPDSSPDITNEESATSTPVTEDRNHAIAFAAATAAAAEAAVAAAQAAARVVRMAGYGRHSKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTREKLRGTMEEHKQKELLLEEPDPKLIMSPITKLDMDGWDNRRQSSQKIKDSDLRKHEAAMKRERALAYAYNYQQQQKQYLHIDPSGDDIESYVNEHEQARLDWNWLERWMSTQSHQVRYLGTRETPYMTTDEEKTVEMDMVASQDSTHTNMGLMNQDFLSSPISNRLHKRQHSAGVPSYMAPTQSAQAKVRGQGPFKQRGSSGPQWNPSIRGSAVGLGCDSSSSGGPIATHPFPRSPNPKINGIRLQSRRISSSSPDNVGVEDWAIALGAHGWV* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02114 452 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Rops10g02114 452 Coils Coil 172 192 - -
Rops10g02114 452 MobiDBLite consensus disorder prediction 23 42 - -
Rops10g02114 452 MobiDBLite consensus disorder prediction 55 69 - -
Rops10g02114 452 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Rops10g02114 452 MobiDBLite consensus disorder prediction 15 69 - -
Rops10g02114 452 SMART iq_5 110 132 IPR000048 GO:0005515
Rops10g02114 452 SMART iq_5 133 154 IPR000048 GO:0005515
Rops10g02114 452 Pfam Protein of unknown function (DUF4005) 333 380 IPR025064 -
Rops10g02114 452 Gene3D - 108 162 - -
Rops10g02114 452 PANTHER IQ-DOMAIN 5-RELATED 1 400 - -
Rops10g02114 452 MobiDBLite consensus disorder prediction 394 419 - -
Rops10g02114 452 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Rops10g02114 452 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02114 Rops-Chr10 38371039 38375379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02114 1 442 IQD Protein Family AT3G49260 47.808 6.81e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02114 - - aprc:113873497 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02114 10 38371039 38375379 Rops10g02114 10 38371039 38375379 ECH