Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02102 ATGTATGCAGAGGCCGGTTTTCTTTTCCCATATTTGCACAACTTCTCTCAAGAACTTCATCAACTTGAGGAGTATTGCAAAACCTACAAGTCCAATGTTTCAATGAGTGACCTTGTTCAGTCTTTTGCCATGTCAGAGTATGATTTGGCTGCAGAGGGAGATCTGTTCAAAGCACCTGAACCTATTATTGAGGAGCCAGTCATGGACCTGGATCCCATGACAGCAGCTATCTCGATGATATCTTGTGGGGAAGATGCCTCCTCACAGGGTCTAAAATCCACAGATATTGATATTCTTCAAAATGAGCAGCTTCTGAGTGAGATGTTTTATGAATGCAAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGCCATCATTCTCTGAGATTCTGGAATTCAAGGTTCCTGCTCTGAATATAGATGAGAACTCATTTCAAGAAAACAAGCCACTTCCTGACATGCCATTACCAAAGAGCGTCAGTTCTGTAAGTTTGAGTTCAATGGACTGGATGCATGGAGCTGCAATGAAGCCTGCTTTCCTTGATATTGCAGGAATAGATTTCAATGCAGTTTACGGCATGCGGAGATCATTTAGTGATGGAGATATAAAGACTCTTGGTATTGGTAATATGAACATTGTCCAATCTCCCCCTGATGTTGAGAGGCCCTTTCTTATCAGCAACTGCACCAGTGAGGATCGCCGACAAAAGCTCTCCAGATACTGGAATAAGAAGTCCAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACTGAAGAATCTGAGGCCAAGAGGGAATGA 852 0.4272 MYAEAGFLFPYLHNFSQELHQLEEYCKTYKSNVSMSDLVQSFAMSEYDLAAEGDLFKAPEPIIEEPVMDLDPMTAAISMISCGEDASSQGLKSTDIDILQNEQLLSEMFYECKKDLLEKAAIEPSFSEILEFKVPALNIDENSFQENKPLPDMPLPKSVSSVSLSSMDWMHGAAMKPAFLDIAGIDFNAVYGMRRSFSDGDIKTLGIGNMNIVQSPPDVERPFLISNCTSEDRRQKLSRYWNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEAKRE* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02102 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 155 277 IPR045281 GO:0009909
Rops10g02102 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
Rops10g02102 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02102 Rops-Chr10 38149002 38154638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02102 229 279 C2C2-CO-like Transcription Factor Family AT5G57660 50.980 1.03e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops10g02102 CCT 1.5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02102 - - gmx:100814332 457.988