Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02100 ATGGCACTTTGTAGAACTGGGCTGAACCCGATCCCGGAGAGTAATAACTTAGCTCATAAAGCTCGAAATTTGTCAACAAGACTTGTTTTACCTGTTCCCCTGAGTTTCATCGGGCAATTCTCTAATTCAGGCAGGAGAAAGAACAAGGGAATATGCTGCTCATCATCAAGGAAAGCGGCATCTGCATCTTCTATGGAGTCACAGGAAGATTCTCCAAGTACCTATTCGGTTTGCTTGGAGGAGGAACTGGATCATGTTATCCAGTTCAAAATGTCAGACTTTACCATTTTAGATCGTGTTAGCACTGGCCTTGGTGGGCGGGCAGACGAGGTAGTTTTTGAAGGCAAGGTGAAGGATAGTGGTAGCCCTTTGTACAACACAAGACTTGTACTTCGTCAGCTTTCTAGCGTCCAAGCTCAACGTAGAGGGAAACGGGCAATAGAGGTTCTGAAGAAGCTGGTACGCCGTAAACTTTTATATCATTCTTACTCGATGCAAGTTCATGGCTATATCTCTCTGCCTGCAAGTGATGGTAGTGGTTCATTTATCCTAGTCCACGGGTACCATGGTAGTTTTTCTCTAAGACACTGGCTTCAACGGTCAGATTGGCTTCCAACTTTAGAGGCCACTCTTGCACTGGATGAAGAGTCTGTTAGAAAGGTAGGAGAAGACACAACTGGAGGTCCTGCAGTTTCCAGGCAGTTGCGGCTTATTCGAATATTGATGAGGGATCTTCTAATTGGGGTAAATTACCTGCACAGCCATGGTCTTGCTCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAGTAGACAGACATATCAAAGTAGGTATACTGGGAAATGCTGCTGATTTTTATGAAGATGGTTCAGACAGTGGCTCTATGGACAACATGGATAGGCGACAGATGATGATTGCATTTGACATGAGATGTGTGGGTTTCATAATGGCAAAAATGGTAATGCGGGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAATCATTCCTCACAAAGGGGTATGATCCTTCATGTTTGCGAGAGCTTATTTTGGAAATCCTTGGTAGAAGCTCCCCAAATGGAAATACTGGTTTACAAATACTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTTGCATCCAAACCTTCTCAAAGGATAAGTTGTTTGGATGCTCTTAGACACCCATTCCTTTGTGGGCCAAGATGGAGAGTAGTGCCTTCCATGGATATTATCAGATGGGGTCTGGGTTCTACTGCAATGCGTATCAGTGAGGAGTACATTTATCGTCAGCCTCAGCGTAATAGGCTTGCCCACTTCATTGACTTGATGGAGATGCTGAATCCTCATCCAAAGCCAAGGAACTGGCTAGAGCTGCTTCCAGGCAAATGGCGTCTATTATATTGCACTGGGAAGCATGTAGGGCTGACCCTTCGCCAACCTCCTGCTCGTGTACTCATAGGAGATGTGCATTTAACTGTGAGAAGAGAATCAAAGATGAAGGCCAATCTTTCATTCTGCTGTGACATTGGATTCTCCGTCATGATTGGTCAGGACTGGCCTCACGACAAAGCTGGTAAAAGTGGAAGATTGCAGGTGAATTCATCATTTGCAGTAAAAGCTGGGAGACGGTTATATATTAAGCAAGAGAAGACCACAGAGAAGTTCTTCTTTAGCCCTTCCAGCAATGAGGAGGCTTTAGCTCAGAAATTCACTGGCAAGAAATGGAGAAAGATAATCCCTTTCAAGGAGTTTCCATCAAGTCTTCCTGCAGCCAAGCTTTCATCAAGTGACATTGATGTGACAATGAATCTTGATGAACCATTGAATCAAAACATTGATACCGCAAGAAATGTTCTTCAAGAAATAAGAACACAAATTCCCCCTGAAATGTTTGATTTGTCAAAGCTTGTGTGTGGAACTTATGTGGACTCAAGGATGCTTGTCCTTCGAGGGGTTAATGGATCAGCTCTCCTATTTACGAGGTCTTTTGTGGATAGAAACAGTTCTAGTCAATTGTTGCTGTAG 2046 0.437 MALCRTGLNPIPESNNLAHKARNLSTRLVLPVPLSFIGQFSNSGRRKNKGICCSSSRKAASASSMESQEDSPSTYSVCLEEELDHVIQFKMSDFTILDRVSTGLGGRADEVVFEGKVKDSGSPLYNTRLVLRQLSSVQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLPASDGSGSFILVHGYHGSFSLRHWLQRSDWLPTLEATLALDEESVRKVGEDTTGGPAVSRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDGSDSGSMDNMDRRQMMIAFDMRCVGFIMAKMVMRELMDPLIFAKFKSFLTKGYDPSCLRELILEILGRSSPNGNTGLQILDRNWGAGWHLLSLLLASKPSQRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGSTAMRISEEYIYRQPQRNRLAHFIDLMEMLNPHPKPRNWLELLPGKWRLLYCTGKHVGLTLRQPPARVLIGDVHLTVRRESKMKANLSFCCDIGFSVMIGQDWPHDKAGKSGRLQVNSSFAVKAGRRLYIKQEKTTEKFFFSPSSNEEALAQKFTGKKWRKIIPFKEFPSSLPAAKLSSSDIDVTMNLDEPLNQNIDTARNVLQEIRTQIPPEMFDLSKLVCGTYVDSRMLVLRGVNGSALLFTRSFVDRNSSSQLLL* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02100 681 ProSiteProfiles Protein kinase domain profile. 94 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02100 681 SMART serkin_6 94 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02100 681 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 402 651 - -
Rops10g02100 681 Pfam PAP_fibrillin 438 665 IPR006843 -
Rops10g02100 681 SUPERFAMILY Protein kinase-like (PK-like) 88 422 IPR011009 -
Rops10g02100 681 Gene3D Transferase(Phosphotransferase) domain 1 230 406 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Rops10g02100 PAP_fibrillin 2.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02100 - - gmx:100809306 1145.95