Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02092 ATGCCAAAGACTCCTGCTCAAGATATGGGCGGCACTTGTTTGGTTGTCCGATTCCCTTTTCGAATCAAAGGCCGCCATCAACGACACTGTGGTTATCCCGGCTTTGATTTATTTTGTTCCTCAACTAATGAGACTGTGATTGAACTCCCAGAGTCAGTGAAGCTCAATGTCAAAAATATTGACTACATACACCAAACAATTGAGTTATTTGATCCACATGGCTGCCTTTCCAGACTACTCCACAACCTCACTCGCTCAGCTACCCACTTCAGGTTCAAGCCCGACCTCTATGGCTATTACTTTTTCAATTGTTCAGTGATGAACAGAGATTTGGAGTACTATTTGGTTCCATGCCTAACAACCTCAAGCTCTAAAGTATATGCCATTTGGTCTTCTGCAACCATCGAGTATATACCCCTGTCGTCTTGCACCAAAATGTTTAATATTTCGTTCATCCCTGATGATTTTCAACCCGAGGAAAACTTTCTTCGTTTGACATGGTCCGAGCCTAAGTGTACGCATTGCGAGTCAAAAGGGAAGAGATGTGGGTGGAAGAATATTACTGCCGCCAACAATGAAACACATTGTTTTGCCATCGCCAATCACAAAGGTTCATCAACAGCTCTAGTAACCACAGGTTCATCAACAGCTCTAGTAACCACAGGTCAATTTTCAAGTTTAGTTATGCTTTTTGAATATTAA 702 0.4217 MPKTPAQDMGGTCLVVRFPFRIKGRHQRHCGYPGFDLFCSSTNETVIELPESVKLNVKNIDYIHQTIELFDPHGCLSRLLHNLTRSATHFRFKPDLYGYYFFNCSVMNRDLEYYLVPCLTTSSSKVYAIWSSATIEYIPLSSCTKMFNISFIPDDFQPEENFLRLTWSEPKCTHCESKGKRCGWKNITAANNETHCFAIANHKGSSTALVTTGSSTALVTTGQFSSLVMLFEY* 234
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02092 233 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 211 IPR046948 -
Rops10g02092 233 Pfam Wall-associated receptor kinase galacturonan-binding 14 71 IPR025287 GO:0030247
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops10g02092 Rops-Chr10 38038932 38040444 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02092 16 228 C3H Transcription Factor Family AT2G46495 27.426 1.69e-21 89.4