Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02086 ATGCCAAAGACTCCTGCTCAAGATATGGGCGGCACTTGTTTGGTTGTCCGATTCCCTTTTCGAATCAAAGGCCGCCATCAACGACACTGTGGTTATCCCGGCTTTGATTTATTTTGTTCCTCAACTAATGAGACTGTGATTGAACTCCCAGAGTCAGTGAAGCTCAATGTCAAAAATATTGACTACATACACCAAACAATTGAGTTATTTGATCCACATGGCTGCCTTTCCAGACTACTCCACAACCTCACTCGCTCAGCTACCCACTTCAGGTTCAAGCCCGACCTCTATGGTGGCTATTACTTTTTCAATTGTTCAGTGATGAACAGAGATTTGGAGTACTATTTGGTTCCATGCCTAACAACCTCAAGCTCTCAAGTATATGCCATTCGGTCTTCTGCAACCATCGAGTATATACCCCTGTCGTCTTGCACCAAAATGTTTAATATTTCGTTCATCCCTGATGATTTTCAACCCGAGGAAAACTTTCTTCGTTTGACATGGTCCGAGCCTAAGTGTACGCATTGCGAGTCAAAAGGGAAGAGATGTGGGTGGAAGAATATTACTGCCGCCAACAATGAAACACATTGTTTTGCCATCGCCAATCACAAAGGTTCATCAACAGCTCTAGTAACCACAGGATCAATCCTAGGATCGTTGTTTTCTATCTTGCTCATTGCTGACCAAGGAGAAATAGTGCAAGTGCAACTGTGGGTTCCGTTGGTAGACAACTACACCGTGATTTAG 747 0.4378 MPKTPAQDMGGTCLVVRFPFRIKGRHQRHCGYPGFDLFCSSTNETVIELPESVKLNVKNIDYIHQTIELFDPHGCLSRLLHNLTRSATHFRFKPDLYGGYYFFNCSVMNRDLEYYLVPCLTTSSSQVYAIRSSATIEYIPLSSCTKMFNISFIPDDFQPEENFLRLTWSEPKCTHCESKGKRCGWKNITAANNETHCFAIANHKGSSTALVTTGSILGSLFSILLIADQGEIVQVQLWVPLVDNYTVI* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02086 248 Pfam Wall-associated receptor kinase galacturonan-binding 14 71 IPR025287 GO:0030247
Rops10g02086 248 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 217 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02086 Rops-Chr10 37930517 37933142 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02086 16 245 C3H Transcription Factor Family AT2G46495 27.083 4.54e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02086 - - lja:Lj0g3v0257919.2 280.796