Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02082 ATGCCAAAGACTCCTGCTCAAGATATGGGCGGCACTTGTTTGGTTGTCCGATTCCCTTTTCGAATCAAAGGCCGCCATCAACGACACTGTGGTTATCCCGGCTTTGATTTATTTTGTTCCTCAACTAATGAGACTGTGATTGAACTCCCAGAGTCAGTGAAGCTCAATGTCAAAAATATTGACTACATACACCAAACAATTGAGTTATTTGATCCACATGGCTGCCTTTCCAGACTACTCCACAACCTCACTCGCTCAGCTACCCACTTCAGGTTCAAGCCCGACCTCTATGGTGGCTATTACTTTTTCAATTGTTCAGTGATGAACAGAGATTTGGACCACTATTTGGTTCCATGCTTAACAACCTCAAGCTCTCAAGTATACGCCATTCCATCTTCTAATCTCATCGAGGATCTGCCCCTCTGGTTTTGCACCAAAATTTTTAATATTTCATCCAGCTTTTCTTATTTTTATCCCAAGAACAACTTTCTTCGCTTAACGTGGTACGAGCCAAAGTGTAAACATTGCGAATCAAAAGGGAAAAGGTGTGGGTGGAAGAATAACACCGCCAACAATGAAACATATTGTTTCGCCAATCACAAAGGTTCATCAACGGCTCTAGCAACTACAGGATCGGTCCTAGGATCGTTGTTTTCTATCCTCTTGATTGCTGCAGTCTACCACATCTATGATTTTTACAAACTACAGAAACAAAAACAAGACCAAGGAGAAATAGTGCAAGTGCAACTGTGGGTTCCGTTGGTAGACAACTACACCGTGATTTAG 786 0.4224 MPKTPAQDMGGTCLVVRFPFRIKGRHQRHCGYPGFDLFCSSTNETVIELPESVKLNVKNIDYIHQTIELFDPHGCLSRLLHNLTRSATHFRFKPDLYGGYYFFNCSVMNRDLDHYLVPCLTTSSSQVYAIPSSNLIEDLPLWFCTKIFNISSSFSYFYPKNNFLRLTWYEPKCKHCESKGKRCGWKNNTANNETYCFANHKGSSTALATTGSVLGSLFSILLIAAVYHIYDFYKLQKQKQDQGEIVQVQLWVPLVDNYTVI* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02082 261 Pfam Wall-associated receptor kinase galacturonan-binding 14 71 IPR025287 GO:0030247
Rops10g02082 261 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 238 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02082 Rops-Chr10 37892080 37894356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02082 16 206 C3H Transcription Factor Family AT2G46495 31.188 8.42e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02082 - - lja:Lj0g3v0257919.2 322.398