Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02076 ATGGTATGCATCAGGAGTGTGAGTTCTATTTTTGTTCGAGTCGAAACCTTTACGAAGAGAGTGCAATTCAACTGTGTTGGGAGGAGGGGTTTGCAAAGAGTTCCATACATTAGTTACTATCAGAATCGTGGTGGATCTAAGAGAAGCATAGGGATGATGGTTGATACAGGTTCAATGTCAAGGGCTGGACCCCTTGTGGATATGATACCCCAGAAAGATGATGGTGGTGGTGATGGTGGTCTTCCCAGTGGAGGGTGGAAGAGTGAAGATCGAAGACTTAGCTGTGGGTATTCAAGCTTTAGGGGGAAGAGAGTGACCATGGAGGATTTCTATGATATTAAGACATCAATGATTGACGGTCAATCAGTATGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTATTTGATAATCTCATGAAGCATCCAAAGTTTTTGACGGATACCAAATTGGCTATAAGTGAAACATATCAGCAGACTGATGTTGATTTTCTGGATTCTGAAAAAGATGCTTTCCGCGATGATGGTTCTACTGCTTCAACAGCAGTTTTGATTGATAATCATCTTTACGTTGCTAATGTTGGAGATTCTAGAACTGTAATATTGAAAGCTGGAAAAGCAATTGCTCTCTCTGAGGATCATAAACCTAATAGAAGCGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTCATCATGTGGGCAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCCCGTGCCTTTGGCAATCGTATGCTGAAGCCGTTTGTTGTAGCAGAACCTGAGATCCAGGACCTGGAGATAGATGAAGAAACTGAGCTGCTTGTTCTTGCAAGTGATGGACTCTGGGATGTAGTACCGAATGATGATGCTGTTTCTCTTGCCCGGGCCGAAGAGGAGGCTGAGGCAGCTGCTCGGAAGTTAACAGAAGCCGCATTTAGTCGTGGAAGTGCAGATAACATTACGTGCATTGTGGTGCGATTCCATCATGAAAAAGCATCCCCAGCTAATCCTGACAAGGCAGGTCCAGCTAGCACTCAGCATGAATAG 1086 0.4466 MVCIRSVSSIFVRVETFTKRVQFNCVGRRGLQRVPYISYYQNRGGSKRSIGMMVDTGSMSRAGPLVDMIPQKDDGGGDGGLPSGGWKSEDRRLSCGYSSFRGKRVTMEDFYDIKTSMIDGQSVCLFGIFDGHGGSRAAEYLKEHLFDNLMKHPKFLTDTKLAISETYQQTDVDFLDSEKDAFRDDGSTASTAVLIDNHLYVANVGDSRTVILKAGKAIALSEDHKPNRSDERKRIENAGGVIMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDLEIDEETELLVLASDGLWDVVPNDDAVSLARAEEEAEAAARKLTEAAFSRGSADNITCIVVRFHHEKASPANPDKAGPASTQHE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02076 361 Coils Coil 306 326 - -
Rops10g02076 361 ProSiteProfiles PPM-type phosphatase domain profile. 94 340 IPR001932 -
Rops10g02076 361 SMART PP2C_SIG_2 90 340 IPR001932 -
Rops10g02076 361 SMART PP2C_4 84 338 IPR001932 -
Rops10g02076 361 SUPERFAMILY PP2C-like 90 341 IPR036457 -
Rops10g02076 361 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Rops10g02076 361 CDD PP2Cc 94 340 IPR001932 -
Rops10g02076 361 PANTHER PROTEIN PHOSPHATASE 78 340 IPR015655 GO:0004722|GO:0006470
Rops10g02076 361 FunFam Probable protein phosphatase 2C 76 86 346 - -
Rops10g02076 361 Pfam Protein phosphatase 2C 95 333 IPR001932 -
Rops10g02076 361 Gene3D - 86 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02076 Rops-Chr10 37778099 37789976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02076 33 344 PP2C-type Phosphatase Gene Family AT5G53140 76.677 2.93e-175 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02076 K17506 - gmx:100805795 544.658