Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02059 ATGTTCTCCCTATGTCATAACTCCACCACCCATTTTGTTCTCTCTTTTTCTGACGAATTCCTGAAATGGTTAGAAGATGAATGGTTCAAAAAAGCATACAAGCCACCATCATTTACAGAGGAAGAGGATATCAATGTAGATGATGTAGCTGCTGCTTTTGATGATTCTAAGATGAAGCTGCAAGGTGATAAGAGTGGAAGGAAGGGTCACCTTTTAGTGGCTACTGAGGTACTGAGTCATTCCTTTATGATTGTAGGGCCTTTTCTATATATAGTCACTAGATGGGATGTGAATGTCGTGGACACTCTTCCAGACTACATGAAGTTGTGCTTATTTGCCCTCTATAACACTGTTAATAACACGGCCTACAACCTCCTTAAAGAGAAGGGGGATAACGACCTTCCTTATCTTGCAAAATCTTGGTTTGACTTATGTAAAGCATTCCTCCAAGAAGCAAAATGGTTCAACAACAAAATCATTCCTCCATTCAACAAGTACATAGAAAATGCATCGGTTTCCTCTTCTGGTGGGGCTTTATTGACTCCATGCTATTTCTCAATCAACCAAGACATCACAAACCAAGCTCTTGATTATTTAACTAATTACCATGGCCTCGTGCGTTCCTCGTGTGCCATTTTCAGATTGTGCAATGATCTGGCCACATCAGCGGCTGAACTAGAGAGAAGTGAAGCCACATATATAGGTCACTCTCGAAGACAGTGA 723 0.4094 MFSLCHNSTTHFVLSFSDEFLKWLEDEWFKKAYKPPSFTEEEDINVDDVAAAFDDSKMKLQGDKSGRKGHLLVATEVLSHSFMIVGPFLYIVTRWDVNVVDTLPDYMKLCLFALYNTVNNTAYNLLKEKGDNDLPYLAKSWFDLCKAFLQEAKWFNNKIIPPFNKYIENASVSSSGGALLTPCYFSINQDITNQALDYLTNYHGLVRSSCAIFRLCNDLATSAAELERSEATYIGHSRRQ* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02059 240 Pfam Terpene synthase family, metal binding domain 88 231 IPR005630 GO:0000287|GO:0010333|GO:0016829
Rops10g02059 240 SUPERFAMILY Terpenoid synthases 92 230 IPR008949 -
Rops10g02059 240 PANTHER OS04G0344100 PROTEIN-RELATED 88 229 - -
Rops10g02059 240 Gene3D Farnesyl Diphosphate Synthase 88 231 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02059 Rops-Chr10 37444383 37446047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02059 25 81 CBL-interacting serine-threonine protein kinases AT2G26980 47.368 2.00e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02059 K12742 - gmx:100786684 214.927