Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02048 ATGGACAAGAAGCTGGTCCTCTTGTTCATTTTTTCAGCAGCCTTCATGATGGAAGTAATGTTTATTAGTGTTGGAGCTGAACCGGTGGAGGATAAACAAGCTTTGCTTGATTTCCTTCACAACATGGATCATTCTCCTCATGTAAACTGGAATGAGAACTCTTCTGTTTGCCAAAGCTGGAGAGGAGTGACCTGCAACACCGACCAATCACGAGTTATAGCTCTTAGATTGCCTGGAGCTGGGTTGAGTGGTCCAATCCCACCCAACACTCTCAGTCGCCTCCCAGCACTTGAAACTGTGAGTCTTAGATCAAATGGTATAACAGGCCCTTTCCCTGATGGTTTCTCTGAGCTAAAAAATTTAACCAGCCTCTATCTCCAATCTAACAAGTTCTCTGGTCCATTGCCATTGGATTTTTCAGTTTGGAATAATCTTACTGTTGTCAATTTATCCAACAATTCTTTTAATGGGAGCATCCCTTCTTCAATTTCAAATCTTACTCATCTCACTTCATTAGTCCTTGCCAACAACTTGCTTTCTGGTCAGATTCCTGATATCAATATTACTAGCTTGAGAGAACTAAATTTAGCCAATAATAACCTTAGTGGGGTTGTGCCCAAATCTCTTCTTAGATTTCCAAGTTCTGCCTTTGCTGGCAACAATCTTACATCAGCAAATGCAGTACCCCCAGCTTTTCCTTTGCAACCACCGGCTGTTCATCCAGTTAAGAAGAACAAAAGACCAAGTGAAACTGCATTATTGGGTATCATTATTGGTGCTTGTGTGCTGGGATTTGTGATGATTGCAGGCTTCATGATTGTTTGCTGCTATCAGAAAGCAGGTGTAGTTGAGCAACCAGTGAAATCCCATAAAAATAAAGTCTCTTTAAAATCAGAATCTTCTGAAAGTCAAGACAAAAACAAAATTGTCTTCTTTGAGGGTTGCAATCTTGCATTTGATCTAGAGGACCTGTTGAGAGTGTCTGCTGAGATTCTTGGAAAGGGTACCTTTGGGACAACATATAAGGCTGCTTTAGAGGATGCAACCACTGTGGTGGTGAAGAGGTTGAAGGAAGTCACGGTTGGGAAACGAGACTTTGAACAGCAGATGGAGGTGGTGGGGAAAATTAAGCACGACAATGTGGATGCATTAAGGGCATTTTACTATTCAAAGGAAGAGAAACTTATAGTATATGATTACTATCAACAAGGCAGTGTTTCTGCTATGTTACATGGCAAAAGAGGAGAAGGCAGAACTTCTTTAGACTGGGATAGCCGTTTGAGAATTGCAATTGGTGCAGCAAGAGGCATTGCTCACATCCATGCTCAAAATGGAGGGAAACTCGTGCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCACAAGGATATGGTTCTGTATCTGATATCGGCTTGGCTGTTTTGATGAGTCCAATACCCTCACCAGCCATGAGCGTAGCAGGATACCGTGCCCCAGAAGTAACAGATACCCGTAAATCAACATACGCATCTGATGTCTACGGTTTTGGGGTCTTGATACTTGAGCTTCTAACTGGGAAATCCCCCATACACACCACAGAAGGTGAGCAAGTAGTCCAGTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTAGAGCTGTTAAGTTATCCAAATATAGAGGAAGAAATGGTGGAGATGCTACAAATAGGGATGGCTTGTGCAGCTAGAATACCAGAGCAGAGACCAAAAATGCCAGATGTGGTGAGAATGATGGAGGGAATTCGTCGTGGTAATAGACCATCCACTGAGTCTAGTACGGAAGTTTCTACCCCAACCACTATTGCAACTGAGATACCTTCTACCTCTGTTCCAAAGTGA 1887 0.4261 MDKKLVLLFIFSAAFMMEVMFISVGAEPVEDKQALLDFLHNMDHSPHVNWNENSSVCQSWRGVTCNTDQSRVIALRLPGAGLSGPIPPNTLSRLPALETVSLRSNGITGPFPDGFSELKNLTSLYLQSNKFSGPLPLDFSVWNNLTVVNLSNNSFNGSIPSSISNLTHLTSLVLANNLLSGQIPDINITSLRELNLANNNLSGVVPKSLLRFPSSAFAGNNLTSANAVPPAFPLQPPAVHPVKKNKRPSETALLGIIIGACVLGFVMIAGFMIVCCYQKAGVVEQPVKSHKNKVSLKSESSESQDKNKIVFFEGCNLAFDLEDLLRVSAEILGKGTFGTTYKAALEDATTVVVKRLKEVTVGKRDFEQQMEVVGKIKHDNVDALRAFYYSKEEKLIVYDYYQQGSVSAMLHGKRGEGRTSLDWDSRLRIAIGAARGIAHIHAQNGGKLVHGNIKASNIFLNSQGYGSVSDIGLAVLMSPIPSPAMSVAGYRAPEVTDTRKSTYASDVYGFGVLILELLTGKSPIHTTEGEQVVQLVRWVNSVVREEWTAEVFDVELLSYPNIEEEMVEMLQIGMACAARIPEQRPKMPDVVRMMEGIRRGNRPSTESSTEVSTPTTIATEIPSTSVPK* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02048 628 SUPERFAMILY L domain-like 43 212 - -
Rops10g02048 628 MobiDBLite consensus disorder prediction 601 628 - -
Rops10g02048 628 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 608 - -
Rops10g02048 628 Gene3D Ribonuclease Inhibitor 29 232 IPR032675 -
Rops10g02048 628 ProSiteProfiles Leucine-rich repeat profile. 190 211 IPR001611 GO:0005515
Rops10g02048 628 Pfam Protein tyrosine and serine/threonine kinase 330 592 IPR001245 GO:0004672|GO:0006468
Rops10g02048 628 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02048 628 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Rops10g02048 628 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Rops10g02048 628 MobiDBLite consensus disorder prediction 598 628 - -
Rops10g02048 628 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Rops10g02048 628 PANTHER OS05G0588300 PROTEIN 9 604 - -
Rops10g02048 628 Gene3D Phosphorylase Kinase; domain 1 290 400 - -
Rops10g02048 628 SUPERFAMILY Protein kinase-like (PK-like) 330 595 IPR011009 -
Rops10g02048 628 Pfam Leucine rich repeat 86 131 IPR001611 GO:0005515
Rops10g02048 628 Gene3D Transferase(Phosphotransferase) domain 1 402 619 - -
Rops10g02048 628 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515
Rops10g02048 628 Pfam Leucine Rich Repeat 190 210 IPR001611 GO:0005515
Rops10g02048 628 FunFam pollen receptor-like kinase 1 295 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02048 Rops-Chr10 37267517 37269993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02048 26 617 Receptor kinase-like Gene Family AT4G23740 56.270 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops10g02048 PK_Tyr_Ser-Thr 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02048 - - gmx:100813065 1015.76