Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02029 ATGAGGAATTTGAGTGTAGTTGCAGTCATGTTGGCAGTAGAGTTATTGGAGGTGACTGTCAACACTGTAAGCAAAGCAGCCATGACTAGAGGCATGAATGACTTTATATTTGTTATGTACTCCAATGCCTTCGCAACTTGCTTCCTCCTTCACTTAACCTTAATCTTTTATAGGAAACGAAGTCTTCCTCCACTGACATATTACATCGTCGGCCAATTATTTGTTATTGGCTTACTCAGTTGCAGTGCTCAGATGCTCAAGTTTTTTGGCATAGGTTACAGTTCTCCTACTATGGCCTCAGCAATGTCCTATTTAGTCCCTGCTTTTACCTTCACACTTGCCGTTCTCTGCAGGATGGAAAAATTAAACTGGAAAGCTAATAGCACTGTGGCTAAGTCCTTTGGCACATTGGTATCAGTCATCGGCGCATTGATAATTACTCTGTACAAAGGCCAGCCGTTCATAAATAATCATTCATCTAATAAATTGTTTGCTAAAAATCTTCTTTCATCTATGCAATTTAACTGGGTGTTTGGGGCAGTGTTGCTTGCGGCTCATAGCTGTGTTCTCTCAATGATGTTTATAGTTCAGACATGGGTAATCAGAGAGTACCCTGCAGAGCTTATGGTAATACTCTTTCGCAGTATGTTAGTCTCTATGCTATCTGTTCCAGCTGCATTGATTTCAGAAAAAGATCCAAAAGCTTGGAAATTGGGACTTAATATGGAGTTGATAGCCATTGGATGTTCAGCAGTTTTCATCGTATCATTTCAAAGTGTGATCCATATTTGGGCCATGGGGAAGAAGGGTCCTGTCTTTGTTGCAATGTTTAAGCCACTTGAAATAGTCTTTGCAGTTGTCATGGGTATAACTTTTCTTGGGGACTCTCTCTATCTCGGAAGCGTGGTTGGTACAGCCATAGTGGTTATTGGTTTTTATGCTGTGATTTGGGGGAAAACTCAAGAAGAGAAGGTGGAGGAAAACTGTGAAGTCAATAACTTCTCATCATACGCGCCCGAGCAGGTCCCTCTTTTGCAGAACAACAGAATGGAGGGATAG 1059 0.4136 MRNLSVVAVMLAVELLEVTVNTVSKAAMTRGMNDFIFVMYSNAFATCFLLHLTLIFYRKRSLPPLTYYIVGQLFVIGLLSCSAQMLKFFGIGYSSPTMASAMSYLVPAFTFTLAVLCRMEKLNWKANSTVAKSFGTLVSVIGALIITLYKGQPFINNHSSNKLFAKNLLSSMQFNWVFGAVLLAAHSCVLSMMFIVQTWVIREYPAELMVILFRSMLVSMLSVPAALISEKDPKAWKLGLNMELIAIGCSAVFIVSFQSVIHIWAMGKKGPVFVAMFKPLEIVFAVVMGITFLGDSLYLGSVVGTAIVVIGFYAVIWGKTQEEKVEENCEVNNFSSYAPEQVPLLQNNRMEG* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02029 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
Rops10g02029 352 PANTHER WAT1-RELATED PROTEIN 6 327 IPR030184 GO:0016020|GO:0022857
Rops10g02029 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 320 - -
Rops10g02029 352 Pfam EamA-like transporter family 9 147 IPR000620 GO:0016020
Rops10g02029 352 Pfam EamA-like transporter family 178 316 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02029 Rops-Chr10 36920895 36923046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02029 2 351 Nodulin-like Gene Family AT5G40240 39.831 3.67e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02029 - - gmx:100804032 469.929