Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02027 ATGGGGAAGGTGAGAGTTGCATTTGTGGGAATGATAATGGCAGAGTGTGCTCAAGTTGGGTTAATAATGATAAGCAAACAAGTGATGGCACAAGGGATGACCAATTTCATCTTCATCTTCTACTCCAATGCTATTGCTGCCCTTCTTCTTCTTCCCTCTTCATTCCTACTCCACAGATCTGAACGTCCTCCAATCACGCTTTCCACCCTTTCTGGATTCTTCTTACTTGGACTACTCGGTTACTTTGCGCAGGCTTTTGGGTATGCTGGAATTTACTTCAGCTCAGCGACACTTGGCACAGCCATGCTCAACCTGATTCCTGGTTTTACCTTCATACTTGCCCTTGTGTTTAGAATGGAACAATTAGATTGGAAAAGATCTAGTAGCATAGCTAAATTATTGGGAACAATAGTATCAATTGCTGGTGCATTTATTGTGACTTTGTACAAGGGCCCTGCACTTCTGATGGGACTATCACCTGAAAACTCATCTCAACATCTAGTTTTGTCACAAGATTCTAATTGGATACTTGGAGGATTATTTTTTGCTGCTGATTGTGTGATGGCTTCAGCATTTCTTATTGTACAGGCTTATATTCTTAAGAAATATCCAGCAGAGTTGATTGTTGTATTCTTTTATTCTTTCTTTGTGGTCATTCTATCTGCTGTGACCTGTTTGGTTGTGGAAAGAGACATCAGTGCTTGGAGCTTGGAACCTAAGTTCAGGTTGCTTGCAGTTTTATACTCGGGAGTCGTTGGCTCTGCATTTCAAGTTGGTGTGACTACATGGTGTTTGCACCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCCTTAGGAATTGTCATATCGGTGGTTATAGGTGTTGTCTTCATTGGGGATGCATTCTATCTTGGAAGTCTGCTTGGTGCTACTGTGATTGTCATTGGATTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAGTGGGAAGCTTGGAATCAAGGGGCAAACAGACCCCTCTTTTGGAGGAAAACAGCATTGAAGACATATCAAGTCATCCCTGA 1050 0.4171 MGKVRVAFVGMIMAECAQVGLIMISKQVMAQGMTNFIFIFYSNAIAALLLLPSSFLLHRSERPPITLSTLSGFFLLGLLGYFAQAFGYAGIYFSSATLGTAMLNLIPGFTFILALVFRMEQLDWKRSSSIAKLLGTIVSIAGAFIVTLYKGPALLMGLSPENSSQHLVLSQDSNWILGGLFFAADCVMASAFLIVQAYILKKYPAELIVVFFYSFFVVILSAVTCLVVERDISAWSLEPKFRLLAVLYSGVVGSAFQVGVTTWCLHQTGPVFVSMFKPLGIVISVVIGVVFIGDAFYLGSLLGATVIVIGFYSVLWGKSKDIEVGSLESRGKQTPLLEENSIEDISSHP* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02027 349 Pfam EamA-like transporter family 179 315 IPR000620 GO:0016020
Rops10g02027 349 PANTHER WAT1-RELATED PROTEIN 7 322 IPR030184 GO:0016020|GO:0022857
Rops10g02027 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
Rops10g02027 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02027 Rops-Chr10 36899457 36902788 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02027 6 344 Nodulin-like Gene Family AT5G40240 42.029 9.83e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02027 - - gmx:100804932 523.087