Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02004 ATGGATGCGAATTCAGAGCAACCCAAGTGGAAAGTTCCAACCTTTTTTCTCCTTCTCAATTCGTTGATCACTTCCCATATTCTATCACTCTTCAATTTCTCAATTTTCAACTCTCGAGATTCATGCGAAAGCCGTTTGAAGGTTGCTCACCCAAGGGAGATGGTGCCTCCAGGGCCACCCACTCCCATTGGTGGTGGTCAGTCTGTTTCACCCTCTCTCTTGAGATCAAATTCAGGAATGTTAGTAGCTCAAGGGGGTCCCGTGCCTTCGCAGGCGGCTTTCCCTTCACTTGTGTCTCCACGTACTCAGTTCAACAACATGAATATTCTAGGAAATATGTCCAATGTAACTTCTATACTGAACCAATCTTTCCCAAATGGAGTTCCAAATCCTGGGCTGTCTGGTCCAGGAACTAGCCAGCGTGGAGGGATGGATACTGGAGCTGAAACAGACCCACTTTCCAGTGTTGGCAATGGAATGAGCTTCAGTAATCCTTCATCCTCATTTGTACAATCAAATATGGTGAATGCTGGTCCCTCTGGTCAAGGTCAGGGTCAACAATTTTTAAACCCTGCTGGTAACCAGCTTTTGCCAGATCAACAGCATTCCCAACAACTTGAACCTCAAAATTTTCAACACGGTCAGCAGTCAATGCAACAGTTCTCTGCTCCTCTGAATACACAGCAGCAACAGCAACCGCATTTTCAATCAATTCGAGGAGGGATAGGTGGTATGGGACCAGTAAAGTTGGAACCCCAGGTAAACAACGATCAACTTGGACAGCAGCAGCAGTTGCAATCATTGAGGAATCTGGCTCCAGTGAAATTGGAACCACAACAAATTCAGACAATGAGAACTCTGGGACCAGTTAAAATGGAGCCTCAGCATTCTGATCAACCATCATTTTTGCAACAGCAGCAGCAGCAACAACAACAGCAGCAGCAATTCCTCCACATGTCTAGGCAATCTTCTCAGGCAGCTGCTGCTCAGATCAATCTTTTGCACCATCATAGGCTTTTGCAGCTACAACAACAACACCAGCAGCAGCAACTTTTGAAGGCAATGCCTCAACAACGGTCTCAACTACCACAGCAATTTCAACAGCAGAATATGCCAATAAGGTCTCCTGTGAAACCAGTATATGAACCGGGGATGTGTGCTAGGCGGCTGACTCATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATTGAGTTCTGGAGGAAGTTCGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATATATGGCACTGCGAAATATGTAATCACAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTTGTACTTTGGAAGAGTTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAACTATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCTGACCTAAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTGCTCAAAAATACCAGGCTTTAACTCAAAATGCAACGCCTAATGTGTCTGTGCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCTAAAGCCCTAGAAGTTCCATTAGTTAATGATTTAGGATACACAAAGAGATATGTACGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAGAGACTGGACCTATGGAGAGCTTAGCCAAATTCCCTCGAAGAACAAGTGGTTCATCTGGAATTCGTAGTCAAGCACAGCAGCATGATGATCAATTACAACAGCAGCAGCAACAACAGCAGCAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCAGTGCAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTTTGTGTAAATAACTCTATCAACTCGGCATCTGCATCAACCACCACAAGCACTATTGTTGGACTTCTCCACCAAAACTCTGTGAATTCTAAACAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCCATTCGGGTTCCATCCCCAGGTTCCTCCAGTACTGTGCCACAGGCCCAGCCAAACTCATCCCCATTTCAATCACCTACACCATCCTCATCTAACAATAACCCTCCACAAACATCTCACCCTGCTTTAACGTCTGCCAACAACATGAGTACAACAAACTCAGCAGCTAATATTTCCTTGCAACAACAGCAGTCATCACTTTCTGGTGAAGGTGACCCTAGTGATGCTCAGAGCTCAGTCCAGAAAATCATACATGAGATGATGATGTCCTCCCAGATTAATGGCACAGGTGGAATGGTAGGTGTTGGTTCTCTTGGAAATGACCTGAAGAATGTAAACGGTATTCTGCCAGTGAGTGCCACTACAGGGCTCAATGGAGGCAATGGCTTGGTGGGCAATGGCACAATGAACAATAATTCAGGGGCTGGTAGTTATGGCGCAATGGGTCTTGGTCAACCCACTATGCCTAATGGAATCAGAGTTCCTATGGGAAATAATTCAGTCATGAATGGAAGAGGAGGAATGGCATCTATTGCTCGGGATCAAGCTATGAATCATCAACAAGATTTGTCAAACCAACTACTTAGTGGGATAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2889 0.4396 MDANSEQPKWKVPTFFLLLNSLITSHILSLFNFSIFNSRDSCESRLKVAHPREMVPPGPPTPIGGGQSVSPSLLRSNSGMLVAQGGPVPSQAAFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGVPNPGLSGPGTSQRGGMDTGAETDPLSSVGNGMSFSNPSSSFVQSNMVNAGPSGQGQGQQFLNPAGNQLLPDQQHSQQLEPQNFQHGQQSMQQFSAPLNTQQQQQPHFQSIRGGIGGMGPVKLEPQVNNDQLGQQQQLQSLRNLAPVKLEPQQIQTMRTLGPVKMEPQHSDQPSFLQQQQQQQQQQQQFLHMSRQSSQAAAAQINLLHHHRLLQLQQQHQQQQLLKAMPQQRSQLPQQFQQQNMPIRSPVKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNHKPGRGFEATVEVLPRLFKIKYESCTLEELLYVDMPREYHNSSGQIVLDYAKTIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQALTQNATPNVSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETETGPMESLAKFPRRTSGSSGIRSQAQQHDDQLQQQQQQQQQMVAHNSNGDQNSVQAAAMQIASSNGMVCVNNSINSASASTTTSTIVGLLHQNSVNSKQNSMNNASSPYGGSSIRVPSPGSSSTVPQAQPNSSPFQSPTPSSSNNNPPQTSHPALTSANNMSTTNSAANISLQQQQSSLSGEGDPSDAQSSVQKIIHEMMMSSQINGTGGMVGVGSLGNDLKNVNGILPVSATTGLNGGNGLVGNGTMNNNSGAGSYGAMGLGQPTMPNGIRVPMGNNSVMNGRGGMASIARDQAMNHQQDLSNQLLSGIGAVNGFNNLQFDWKPSP* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02004 962 MobiDBLite consensus disorder prediction 297 312 - -
Rops10g02004 962 MobiDBLite consensus disorder prediction 636 688 - -
Rops10g02004 962 MobiDBLite consensus disorder prediction 807 826 - -
Rops10g02004 962 MobiDBLite consensus disorder prediction 124 220 - -
Rops10g02004 962 MobiDBLite consensus disorder prediction 291 312 - -
Rops10g02004 962 PANTHER LIM DOMAIN-BINDING PROTEIN 261 951 IPR029005 -
Rops10g02004 962 MobiDBLite consensus disorder prediction 732 796 - -
Rops10g02004 962 MobiDBLite consensus disorder prediction 647 688 - -
Rops10g02004 962 Pfam LIM-domain binding protein 389 643 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02004 Rops-Chr10 36526839 36535038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02004 54 958 C2H2 Transcription Factor Family AT1G43850 59.725 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02004 - - gmx:100799771 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02004 10 36526839 36535038 Rops10g02004 10 36526839 36535038 ECH