Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02000 ATGTCTCAGGGAAGAGGCAGTGCATCTTCTTTATCAATGGTTATGGTCACTGTGATTTCACTACTGTGCCTGTTGGTTCTGGTGGAACATGCTCATGCAGCAACTTACACCGTTGGAGGACCTGGGGGATGGACCTTCAACACTAATACTTGGCCCAATGGAAAAAAGTTTAGAGCTGGTGATGTGCTAATCTTCAACTATGACTCAACAACCCACAATGTGGTTGCCGTGGACAGAAGTGGATACAACAGCTGCAAGACACCGGCGGGTGCTAAAGTTTTCAGTTCAGGAAAGGACCAAATCAGGCTAGCAAGAGGGTTGAACTACTTCATATGCAACAATGCTGGTCACTGTGAATCTGGGATGAAGGTTGCCATTAATGCAGTGTGA 390 0.4641 MSQGRGSASSLSMVMVTVISLLCLLVLVEHAHAATYTVGGPGGWTFNTNTWPNGKKFRAGDVLIFNYDSTTHNVVAVDRSGYNSCKTPAGAKVFSSGKDQIRLARGLNYFICNNAGHCESGMKVAINAV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02000 129 PANTHER BLUE COPPER PROTEIN 28 127 IPR039391 GO:0009055
Rops10g02000 129 Pfam Plastocyanin-like domain 44 122 IPR003245 GO:0009055
Rops10g02000 129 CDD Plantacyanin 34 128 IPR041844 -
Rops10g02000 129 FunFam basic blue protein-like 34 128 - -
Rops10g02000 129 ProSiteProfiles Phytocyanin domain profile. 34 129 IPR003245 GO:0009055
Rops10g02000 129 SUPERFAMILY Cupredoxins 34 128 IPR008972 -
Rops10g02000 129 Gene3D - 34 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02000 Rops-Chr10 36475213 36476087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02000 1 129 Phytocyanin Superfamily AT1G17800 39.416 1.40e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02000 - - gmx:100788635 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02000 10 36475213 36476087 Rops10g02000 10 36475213 36476087 ECH