Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01994 ATGGAGAGTCCTCCTCCTCCTCCGTGTTACGTGGTGGTTGCATGTGATGCCACCAAGGACCGTAATGAGCACGATATCAAGCTCGTCGTTGATCACGTTCGAGCCAGGCGTGTCTTTCTCTCTGCTGGTGACAAGTTGGTTGTGCTTTGTGTCTTGCATAAGGTCCCTCACCCTATGGGGTACCACACATTAGCATGCCTCGAGTCTTTTGCTGGCACCAACTTTCGTGCAATGGAGGAAGAAGTCAGAAAGAAATTGGATGTATATGCAAATGAGCTTTTATCAAGTTATGAAGATTTTGAAAATGAAGGGGTTAGCATCGAAGTTAAAGTCACCGCGGGATTTCCAATTAGACAGGTTATTTCACAAGAGGTTACAAACTACAATGCATCTTGGATTATAATTGATAGACACCTACGGCGCGACCTGAGATCTCACCTTAACAAGATGCCATGTAAGGTTGCATTGGTTAAAGATGATTTGTCTGTGGATGTCTGGAGGTCTCATTATGCACAAGTCACAAATGTCACAGAAACAAAGGTTGTGTATTCTTTGTCCAAGTATGTGTCATTATCAGATTGGCATGGTACTCATCAAGACATTGAGCAGTCTATTCACTCTTGCAAAAGTTATCCACATTCCATAGTTTCTTCTGATAGTTCTAGTACCATTAAGAGCTATATGAAGCATTCATATGCTAAAAAGTCAAGGGAGCAAAATTCTTCATTAGATTTTGGATCTTATTCTAAGCTAGAAAGACCAGGCATGAGCATCAAAGAAGAATATAGGCCTCTCATTACTTCTCAGATTGGCCAAAAGCAAAACCAATGTGGCTTTCTACCAAAATCTTCAGATGCACCAATTCTCTGTGCTGGATGTGGGATAAGGACTGAGTTATCTATCAAGGAGTCAATGAGGTTCACCTATTCTGACATACAGCTTGCAACAAATGATTTTTCAAAGGATAACTTATTAGGTGAAGGTGGATATGGTCATGTGTTCAAGGGTGTGCTTAAAGATGGACAGCAAATTGCTGCAAAGGTAAGGAAAGAAGAAAGTGCACAAGGGTTCTCTGAATTTCATTCTGAGGTGTACGTCTTAAGTCTTGCACGACACAAGAATATAGTGATGCTGTTGGGTTATTGTTGCAAAGAAAATAAAAATATTCTAATATATGAATATGTTTGCAATAAGTCCCTTCATTGGCATTTATTTGAAAATACTGCAGCAGTTCTTGATTGGCGCCAAAGGTATGACATCGCCATTGGTACTGCAAAGGGATTGCGTTTTCTACATGAGGAGTGTCGTGGTGGTCCTATTATTCATCGTGACATGCGACCAAGCAATATACTTGTAACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCCAAATGGACAACTGGTAATGATACCCTGCAAACAAGGATAATGGGTACATTAGGATACCTTGCTCCTGAGTATGCTGAAGATGGTATTGTTTCTAAAGGGACAGATGTGTATTCTTATGGTGTCATTCTGTTACAACTCATATCAGGACGCCAAGTGGGCAACTCCAATAATCCAGAGCAACAACAATCTCTCAGACAATGGGCTGAGCCATTGATTGAGAAGTTGGCTTTACATGAACTGATTGACCCTCGTCTTGGGGAATCATATGACACATATGAACTATACCTCATGGCAAAAGCAGCATACTTTTGTGTTCAAAGAAAACCTGAGATGCGTCCATCAATGGGAGAGGTTGTGCACCTTCTTGAGGGACAAAGTAGCCACTTCCACTCCCTGGAAGATCAATTTGTACATAATTGTAACGACTGA 1827 0.4116 MESPPPPPCYVVVACDATKDRNEHDIKLVVDHVRARRVFLSAGDKLVVLCVLHKVPHPMGYHTLACLESFAGTNFRAMEEEVRKKLDVYANELLSSYEDFENEGVSIEVKVTAGFPIRQVISQEVTNYNASWIIIDRHLRRDLRSHLNKMPCKVALVKDDLSVDVWRSHYAQVTNVTETKVVYSLSKYVSLSDWHGTHQDIEQSIHSCKSYPHSIVSSDSSSTIKSYMKHSYAKKSREQNSSLDFGSYSKLERPGMSIKEEYRPLITSQIGQKQNQCGFLPKSSDAPILCAGCGIRTELSIKESMRFTYSDIQLATNDFSKDNLLGEGGYGHVFKGVLKDGQQIAAKVRKEESAQGFSEFHSEVYVLSLARHKNIVMLLGYCCKENKNILIYEYVCNKSLHWHLFENTAAVLDWRQRYDIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILVTHDFVPMLGDFGLAKWTTGNDTLQTRIMGTLGYLAPEYAEDGIVSKGTDVYSYGVILLQLISGRQVGNSNNPEQQQSLRQWAEPLIEKLALHELIDPRLGESYDTYELYLMAKAAYFCVQRKPEMRPSMGEVVHLLEGQSSHFHSLEDQFVHNCND* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01994 608 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 34 160 - -
Rops10g01994 608 ProSitePatterns Tyrosine protein kinases specific active-site signature. 440 452 IPR008266 GO:0004672|GO:0006468
Rops10g01994 608 Gene3D HUPs 10 158 IPR014729 -
Rops10g01994 608 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 283 594 - -
Rops10g01994 608 Gene3D Phosphorylase Kinase; domain 1 294 394 - -
Rops10g01994 608 CDD STKc_IRAK 325 590 - -
Rops10g01994 608 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Rops10g01994 608 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 291 394 - -
Rops10g01994 608 Pfam Protein kinase domain 320 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01994 608 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 395 603 - -
Rops10g01994 608 SUPERFAMILY Protein kinase-like (PK-like) 303 587 IPR011009 -
Rops10g01994 608 ProSiteProfiles Protein kinase domain profile. 319 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g01994 608 Gene3D Transferase(Phosphotransferase) domain 1 396 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01994 Rops-Chr10 36347814 36357481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01994 307 589 Trihelix Transcription Factor Family AT5G38560 44.828 3.95e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Rops10g01994 Pkinase 6.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01994 - - vun:114163670 971.459