Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01964 ATGCCACCGCGGCGATTCACAACATCAGCGGCGAGGCAGAACCTGAAGTTGCGGTGCCTTTGCTGCGACGAGGAATATGATTCCATGGACGTCGGAACATGCAAATGGTGTTACGATGTAGCCAGGGATATGGAGGAGGAGCACAAGCGTCAGATTCGAGACTTGAAGTCCAAGGTTTCATTCCTTACTCTCGATGCTCCCTCCACCACCGATCTCGTTCTCGTTCCCACCTCTGACGCATCCGCTCCTTCTGTTCCCGCTCACAAGACTGTTTTGGTTAGTCGCTCTCCAGTTTTCAAAGCCATGTTTGAGAATGATATGGAGGAAAGCCGGAGCGGGATCATCAAGATTACTGACGTATCATATGATACTCTTTGTGCTTTTATTAACTATTTATACACTGCTGAAGCAAGCCTTAATGATAACCAAATGGCATGCAACCTATTAGCTTTAGCAGAAAAGTATCAGGTGAAGCATCTTAAGACATTTTGTGAGAAGCATTTGATCGCCGAACTGAATCGAGAGAAAGCTGTTTCAAACTATGTCTTTGCACAACAACACAACGCCAACCGATTGCTAAATGCAGCCTTGGCAGTGATCAATGACAACATGGACAGCCTTACTACAAACGAAGATTATAAGGAGCTGGTGAATAGTAATCCTCGTCTTATCCTGAAAATATATGAAGCTTATTTTGCTAAACAGGTTAATACTGCTGCCACCTATACAAAGCGTAGGAAACAAACGTAG 750 0.4467 MPPRRFTTSAARQNLKLRCLCCDEEYDSMDVGTCKWCYDVARDMEEEHKRQIRDLKSKVSFLTLDAPSTTDLVLVPTSDASAPSVPAHKTVLVSRSPVFKAMFENDMEESRSGIIKITDVSYDTLCAFINYLYTAEASLNDNQMACNLLALAEKYQVKHLKTFCEKHLIAELNREKAVSNYVFAQQHNANRLLNAALAVINDNMDSLTTNEDYKELVNSNPRLILKIYEAYFAKQVNTAATYTKRRKQT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01964 249 Gene3D Potassium Channel Kv1.1; Chain A 41 173 IPR011333 -
Rops10g01964 249 Coils Coil 247 249 - -
Rops10g01964 249 Pfam BTB/POZ domain 69 170 IPR000210 GO:0005515
Rops10g01964 249 ProSiteProfiles BTB domain profile. 70 141 IPR000210 GO:0005515
Rops10g01964 249 PANTHER SPECKLE-TYPE POZ PROTEIN 37 241 - -
Rops10g01964 249 Gene3D - 174 249 - -
Rops10g01964 249 SMART BTB_4 70 172 IPR000210 GO:0005515
Rops10g01964 249 Coils Coil 38 58 - -
Rops10g01964 249 SUPERFAMILY POZ domain 69 169 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01964 Rops-Chr10 35830448 35832342 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops10g01964 BTB 9.2e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01964 K10523 - gmx:100794118 298.516