Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01963 ATGGAGAAAGAGCTCAAGAGTGAGATCCAAGACTTGAAGTCAAAAGTTGCATTCCTCGCTCTCTCTTCTCCCTTCAATGCTCCTTCCTCCACCACCGATATCCTCCTCGTTCCCTCTACTGATGCTTCTGCTTCCTCCATTCCCACTCACAAGGTCGTTTTGGTTAGTCGTTCTCCAGTTTTCAAGGCCATGCTTGAGAATGACATGGAGGAAAGCCGAAGTGGCATTATCAAGATTACTGACGTACAGCATCTGAAGACATTTTGTGAGAGGCATTTAATAGCCGAACTGAATCGGGAGAAAGCTCTTGCAAACTATATCTTTGCATTTCAACACAATGCCAACCAATTGCAAGATGCAGCCATGGCAATGATCATTAACAACATGGATCATGTTACTAAAAGTAAAGATTATATGGAGCTCGTGGATAACAATCCTCGTTTTGTTGTTGAAATATATGAAGCACACATTGCGAAACAGATTAATATGAAACTCCCTCCATTCAGGACATGA 513 0.423 MEKELKSEIQDLKSKVAFLALSSPFNAPSSTTDILLVPSTDASASSIPTHKVVLVSRSPVFKAMLENDMEESRSGIIKITDVQHLKTFCERHLIAELNREKALANYIFAFQHNANQLQDAAMAMIINNMDHVTKSKDYMELVDNNPRFVVEIYEAHIAKQINMKLPPFRT* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01963 170 Gene3D - 96 169 - -
Rops10g01963 170 SUPERFAMILY POZ domain 32 84 IPR011333 -
Rops10g01963 170 CDD BACK 106 141 - -
Rops10g01963 170 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 81 161 IPR044784 -
Rops10g01963 170 CDD BTB_POZ_ZBTB_KLHL-like 46 84 - -
Rops10g01963 170 Gene3D Potassium Channel Kv1.1; Chain A 25 84 IPR011333 -
Rops10g01963 170 ProSiteProfiles BTB domain profile. 32 116 IPR000210 GO:0005515
Rops10g01963 170 Pfam BTB/POZ domain 30 84 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01963 Rops-Chr10 35823418 35824439 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops10g01963 BTB 2.6e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01963 K10523 - gmx:100794118 179.489