Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01962 ATGCACTGCATGCAGATTGGATTCCACGCTCTGGTTAGTCGCTCTCCAGTTTTCAAAGCCGTGCTTGAGAATGATATGGAGGAAAGTCGGAGTGGCATCATCAAGATCAATGATGTATCACACGATACTCTTCGTACTTTTGTTAACTATTTATACACTGCTGAAGCATGCCTTGATAGCCAAATGGCATGTAACCTATTAGTTCTAGCAGAAAAGTATCAGGTGCAGCATCTGAAGACATTCTGTGAGAGGCATTTACTAGCCGAACTGAATTGGGAAAAAGCTCTTGCAAACTATGTCTTTGCACTTCAACACAATGCCAATCAATTGCAAGATGCAGCCATGGCAATGATCATTGACAACATGGACCGCCTTACTAAAAGTAAAGATTATAAGGATATCGTGGATAGCAATCCTCGTCTTGTTGTGGAAATATATGAAGCATATCTTTCCAAACTGATTCATATGAAACTCCCTCCATTCAGGACATGA 492 0.4085 MHCMQIGFHALVSRSPVFKAVLENDMEESRSGIIKINDVSHDTLRTFVNYLYTAEACLDSQMACNLLVLAEKYQVQHLKTFCERHLLAELNWEKALANYVFALQHNANQLQDAAMAMIIDNMDRLTKSKDYKDIVDSNPRLVVEIYEAYLSKLIHMKLPPFRT* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01962 163 SUPERFAMILY POZ domain 11 87 IPR011333 -
Rops10g01962 163 ProSiteProfiles BTB domain profile. 11 60 IPR000210 GO:0005515
Rops10g01962 163 SMART BTB_4 7 90 IPR000210 GO:0005515
Rops10g01962 163 Pfam BTB/POZ domain 11 87 IPR000210 GO:0005515
Rops10g01962 163 Gene3D Potassium Channel Kv1.1; Chain A 8 91 IPR011333 -
Rops10g01962 163 Gene3D - 92 162 - -
Rops10g01962 163 PANTHER SPECKLE-TYPE POZ PROTEIN 11 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01962 Rops-Chr10 35792268 35793017 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops10g01962 BTB 1.9e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01962 K10523 - ini:109170351 213.772