Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01953 ATGCAGTTATATCATCATCCATTTGATTTGGACAGCCAGAAGGTGAGACTTGCGTTAGAAGAGAAAGGCATTGATTATACATCTTACCATGTCAATCCCATAACTGGCAAGAACTTGGATTCCTCATTCTTCAAGATGAATCCCAGTGGAAGACTCCCCGTATTCCAGAATGGCTCTCACATTATTTACAAGACTATTGACACAATCCAGTACATAGAAAGAATTGCTGTGATCTCCTCAGGGTCTGAGAGTATCAGTACCAGTAGCAAGGAAGTGATGGAATGGATGCAGAAGATACAAGAGTGGGATCCTATGTTTTTTACTCTTTCCCATATACCAGAGAAATACCGGATTTATGTTTCCAAGTTCATAAGGCGGGTGGTGATAGCTCGTATGTCTGAGTCCCCTGAATTAGCAGGTGCTTACCATGGGAAGTTAAAAGAAGCCTATCAGATTGAAGAAAAATTGAAAGACCCTGATGATTTGAGAAGGAGAAAGGAGCATTTGGTTAGATTGCTTGATGAAGCTGAGAGGCAGCTGAGTGAAACACCTTATTTGGCAGGTGAAGAGTTTACCATGGCTGATGTGATGCTCATTCCAGTGTTGGCTCGTTTGGTACTCTTGGATTTAGAGGATGAGTACATAACTGGCAGGCCAAACATTGCTGAGTATTGGGTTGTATTTCAGCAGAGGCTTAGTTATAGAAAGGTGATTGGTAAGTATTTTGATGGTTGGAGAAAGCACAAAACATTATTAAAAACTTGGTGCTTTGTTCGTATTAGAAGTATGCTGAAGAGGTACTAG 804 0.4092 MQLYHHPFDLDSQKVRLALEEKGIDYTSYHVNPITGKNLDSSFFKMNPSGRLPVFQNGSHIIYKTIDTIQYIERIAVISSGSESISTSSKEVMEWMQKIQEWDPMFFTLSHIPEKYRIYVSKFIRRVVIARMSESPELAGAYHGKLKEAYQIEEKLKDPDDLRRRKEHLVRLLDEAERQLSETPYLAGEEFTMADVMLIPVLARLVLLDLEDEYITGRPNIAEYWVVFQQRLSYRKVIGKYFDGWRKHKTLLKTWCFVRIRSMLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01953 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Rops10g01953 267 Pfam Glutathione S-transferase, C-terminal domain 162 224 - -
Rops10g01953 267 CDD GST_N_family 1 73 - -
Rops10g01953 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Rops10g01953 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Rops10g01953 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 114 251 IPR010987 -
Rops10g01953 267 Gene3D - 116 238 - -
Rops10g01953 267 CDD GST_C_family 148 225 - -
Rops10g01953 267 Gene3D Glutaredoxin 1 75 - -
Rops10g01953 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Rops10g01953 267 SUPERFAMILY GST C-terminal domain-like 154 237 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01953 Rops-Chr10 35671434 35674020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01953 1 267 Glutathione S-transferase Gene Family AT1G77290 68.165 5.53e-140 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01953 K22077 - gmx:100792543 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01953 10 35671434 35674020 Rops10g01953 10 35671434 35674020 ECH
Rops9g02504 9 46960426 46962683 Rops10g01953 10 35671434 35674020 PCT