Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g01952 | ATGGGCTCGTGTGGGGAATCTGGTATCGTTGTTGATCCCTCAGGCGGGTCTGTTATTGAGCAGCATTTGTGCTCAGAGATTCCGTTGCAGTTAGTTGCTGGTTCAGAAGAAGCTTGCAATGTGTTGGACTCTAATGTTGACCTCTCTGGTATGAATGATGGTTGTATGGGAGAGGGTTCTGCAAGCATTGTTGATGTTACTGAGGGGTCTAGAGATGCTTTGGTAAATGAATGTGTAAATGTTGATATGTCGCAATTGGAGAAAACTTCTGAGGATGATTGTCAGAATTGTTTGGGGATTTGTGGGGAAATTGAAGTTTCCTGCCTAAAAAGTGATGGGTTGTGCTCAGAAGGAAATTTTCAAGATGAACCGTCAGAGTCCATAACCACAAATGATTTGCAGAAGCAATGTGTGCAACATGGTGAGCAGAAGGATGATGAGAGCAACATGGCAGGAGATGATTCGGCAGCCATGGAAGGAAAAAATGATGATGCTGGTTTACTGGCTGATGCTTTCAATTGTGTGCTTGATTTCAGGCATTCTGAAATGTCTTTGGAATCAGAATCCATGAATGAATTGCGAGTTGATGGCAACCAGCAAAACGAGCCAGAGGAAATTATGAATGATACAGATACCTTGTTGAAGGTTGTGGGAAAATGTGATGCTTTAGATGGGATGGAAGCCAATGCTTGCAGGCAGATATCGCCTTCACAGGGTATGGAAGTGCCGTCAGGTGCATTATGTACAGATACAGAGGTAGCGAGCACAAATGATGAACTATGTGATCAAAAAGATGGTGAGGATTGGAATAGTACTTGTGAAGAAAATATCAAAGCTGCTGTTGATAAAGAAATCACTATTAATTCACGTGTACTAGTATCGTCTTCACCAGGTTGCCATGGGACCTTGAGGAGTTCACCTGTAGTTGATTCACTTCATGAGCCCACCCTGCTGGATCCGGGTAGTGAAATGAAGAACAGTATACTGCAAATAGAAGATGATTTCTGTAAATTGAATGACTCTTCCCCAGAGGGAACTACCGACTCTACTTTTGGAAAACCATTTTATCCAGAATCAGGTCAGCCCTCTGTTGTTTTAATCACCAATAGCTCTTCGAAGGATGTGCCTGATCTCCTCTCTAAGGGTGATGACGTTTCCATCAATAATAATAGTGCTGTGGACCATCCTGGAGAGACAAATAATGATGGAAAAGAAGCTGTTACAGTTGATTGTATAACTGAAAGCATACTGTTACCTTCTCAAAGGAACAGTCGAAGAACTAAATTTGGTCGTAAGACACAAACCAAAAAGGCTTCAAGAAAATGCAAGAACAAAGCCAGCATGACACATCCATGTGAGGTTGTGAAGATAAACTCAGAGGCTGCTAGAAAGAAAAGAAGTTGTTTATCCAAACCAGCTCGTTCTTCTATCTGGGGATTGTTGGGGAACATTAAACAGTTATTTCAGCAAGAGACTGAGCTTGAGGTAAGTGAAGCCATATGCCAGGAATTGGGGAAGGCTAGAAGCAAGCGCCAAAGCAGGAAAGCAATTAAGAATGGTGCAAGTTCGAGCTCATTGAGTTCAGTGCAGAAGTATTCTGTTTCAACTTCAACTACTCGTGTTCGTCTAAAGATCAAGATTGGAAAAGAAATTGATTTAAGTTGCTCAAATGTCTTGATTCCAGAGGCTGTTGGGGGCTCGGATTCTGCTTCCTACTTGGAGTCTGATTCAGGCTCTCATAGAGTAGCCAGCAATACTGAAGATAAATTTTCTGAAGTGGCGACTCTGGGCAATCTAGAATCTTTCAAAAATGACCTGGACAAGGATTGTCTTGTTCTAAATGGACAAATTGCAAATACCCACTTAGAAAATACTGAAATAACGGAAAAGTCAGATGGAGATGCAGAGGAACCGTGTCTTACAGTTCCTCCTGAGAAGGTGATTGAAGCATTAGTTGAGCCTATCAATAACAAGGTTATGGATCCTGGAACTTCACCTGATTCAGAAGTTATCAATTCAATTCCAGAAGTCCAGGTTGGAGAAAGACATGAAGAAGATGTACATCATGCTGCTTTAGGTTCTTCTAAGGAGTTCAACCCTAATTTGGATGTTACCATCAGTAAGAGAGGGAAGAAGAAAGACAAGCTAATTTCAGGTAATCGTGTCACTGAAAACGGATCACAAGGACCACCTGGGAATAATAAAGTTAAGCATTCAAAGAATCGCAGACGCAAGAAGAATTGCAGTGATGCGGTTAGCTCTTTGGAATTACCTACTTCCACTGAGATAAGCAAATCAGTAAATAGTAAAGAATTGTCTGCAGAAACATTGCCCCTTTCTGGAGAGATTGAACTTGGAGGCTCCACCAAGGATTTGAAAGTTCAGGGTCATGTGGAAGTTAAGACAACTTGCAAACCATCTGTTGACAATGGACATTCAGAAACCCAGGGTTCTGAGAATTTGCTGTCTTCTGCAAGATCTTTGGGGCGTAAACTACCTAAAAGTCTTAAACCTAGGAAAGTTAGCAAGGCCAAACCTAAAGCTTCTGACTCAGAGAGCAGGAAAAAGACTACTCCTAGATGCAAGGAGAAACAGAAAAAGCCAATTAAGAGTGAAGTCAAGGGAAAAGGTGTCTCTCTTAAAGTTACGTGTGAAGTGGATGATGGCTCACATCCAGCACATGTAGCTGGAAATCATAAGCTAGATGCTGTTGGAAAAATTAATGCCAGTGACAACAGATTATCAGTCAATGTATCTGATTTGGACATGCTGCCTGGTGTTGGTTTGGGAGAGCAGCATCCATCACCACATAATGCATGGGTGCGTTGTGATGATTGTCACAAGTGGCGGCGTATTCCAGCTGTGCTTGCAGACCTGATCGATGAAACTAATTGCACCTGGACATGTAAGGACAGCAGTGATAAAGCCTTTGCTGATTGTGCCATCCCTCAAGAAAAGTCAAATGCAGAGATTAATGCAGAGTTGGGATTATCAGATGCCTCTGGTGAAGAAGATGTGTATGAAGACTCCAAAAATTATAAGGAATTGGAATATCGACTGCCATTGGTTTCCCAGGAGTCAACTTTTACCCGTATTTTTACCAATGAGTTTCTGCATCGAAGCTGTAAAACTCAGACTATTGACGAGATAATGGTCTGCCATTGCAAGCCACCCCCAGAAGGCAAGTTGGGCTGTGGGGATGAATGTCTAAACCGGATGCTTAACATTGAATGTGTGCAAGGAACCTGCCCATGTGGGGACTGTTGTTCCAATCAGCAGTTCCAAAAACGCAAGTATGCCAGCCTGAAGTGGTTTAAATGTGGCAAAAAAGGTTATGGACTGAGGGCGCTTGGGAATGTAGCTAAGGGCCAGTTTCTTATTGAATACGTTGGAGAGGTGCTTGACGTGCATGCTTATGAGGCACGGCAAAGAGAGTATGCTTTGAAGGGTCATAGACATTTCTATTTTATGACCTTAAATGGCAGTGAGGTGATAGATGCGAGTGCAAAAGGAAACTTGGGGCGCTTCATTAATCATAGCTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATTTGTATTGGACTGTTTGCATTGAGGGATATTAAGCAGGATGAAGAATTAACATTTGATTACAACTATGTAAGGGTTTTCGGTGCCGCTGCCAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTATATAGGCGGCGGTGATCCACTTAATGCTGAACTGATAGTTCAAGGTGATTCAGATGATGAATTTCCTGAACCTGTGATGCTTACTGAAGATGGTGAAATCGAGGACAGTGTACCTATACCCAAGTACTTTGACAATGTTGATACAGAGTCTTCTAAGCATTTGTTAAAAGACAAGGGTGGATTGGACAAGTCTACAACTGCTATACATGCAGATGGTTCTTCAGAGAAAGAGAGTTCTATGAACCCTGCCTCTGCGGTTTCCCTGTTGCACAGCTCAGTTGAAGTTGAAGACTCAAAGGGCAATTTACCGTCTTCTGTTCAAATAGAAGAAATTTCTCAACAAATGGAGGATGTAACAAGTAAACCCATTCCTGCTGTACAACAAGGATATGCAATGGAATCAGAGTCTGTAGACAAAACTTCCTGCATTCAAAGATTAGAGACTACTTCTTCCCTTACAACTGTCAGCAAAGTGTTATCAAATTCTACTGGTAGTAATAAAGAATCCAAGTCTGAAATAGTTGAAGGCAGGAATGATTTCTCAGAGTCACATCTGCTTGTGAAGACTCCTAAACTAAAAGGTTCTGTTAAAAAGGGAAAGGTTCGTGCTAATCCTTCAAATGGCCTTAAAGCTGAGGTGACAGCCAACCAATTGCAGGTGTCATCTATCAAACACAAAAAAACAGTAGAAGGTTCTTCAAATGGACGGTTTGAAGCAGTTCAAGAGAAACTTAGTGAGTTGCTGGATGGAGATGGGGGAATAAGCAAAAGAAAAGATGCCACCAAAGGCTACTTGAAGCTTTTGCTTCTCACTGTGGCATCAGGTGATAGAAGCAATGGTGAAGCAATTCAGAGCAATCGAGATCTTTCCATGATCCTTGATGCCCTTCTGAAAACAAAATCTAGAGCCGTGCTGAATGATATAATTAGCAAAAATGGTTTACAGATGTTACATAACATAATGAAGCAGTACAGGCAGGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGGTTTTGGAGTACCTAGCAGCAGGCAAGATATTGACATCTGAACATATCAACAGTGGTCCTCCTTGTCATGGAATGGAGAGCTTTAGGGAGTCAATGCTGTCTCTAACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCCCAGACCTGTCAGAAAACACGGCTATATGGACAGGGATGATAATAGGGTTGAATCCCACAGAAGTTTTAACTGCAACAGATTTTCATCATTACACAATCATAGGCATGAACAGGATTTCAAATCTACAGAAGCAATTGATTGCGGTCAGCAGTCAATGCTTGTGACAACTTCAGCAGATGCTGGTGCCCAGGAAGGCTGCTCTCCAGGGTCTCTAGATAGGGTTGAAATCAACGGGCCAAAAAAACGTAAGCGCAAAAGCCGATGGGATCAACCAGCAGAGACAAATTCACATTCTGATGTGGTTATTAGCTCTAATGATGAAAGCCAGAACATTCATGAAGATGTTCCACCAGGGTTTTCGTGTCCAATACGATCATTGAACACTTCACTAAACTCTGGTGATCCTGCTTTGCAAAATGCAAGCCATTCTGGATGTCCCTCTGATTTAGTTATCGGTCATCCAAAAGAGAAATTTAACTCTCGTTTGCCTGTCTCATATGGAATGCCATGGTCTGTTGCCCAGCAATATGGAACCCCTCATGCTGAAATCACCGAGTGTTGGATCACTGCACCTGGCATGCCTTTCAACCCATTTCCTCCACTACCCCCATATCCCCGAGATGACAAAGACTGCCAACCTTCTAATACTACTGATGCCATGGCAATTGATCAGCCTGCTGAAGTTAAGCAGTGGGATACCAGTGGTCGAGTTAATTGCTGCTCAGATGATATGATTCCCAGCACAACCGGTTCTAATCCTGAAGATATGAACCTTCCATGTGAGGACAATAAACACATCACTAAGCGATTGAAGGGTGACTCCAATGATTTGGGGAGGAGGTACTTTAGACAGCAGAAATGGAATAATTCAAAAATACATCGACCATGGTTCAAGAGGAATGCATGGAAATGTAATGGGAACAACCCTAGTGGTGATATGTGCAGTATAGATGTAGGAGATGTACCAAAAGAGTCAAAAGTTACTTGTTCTTCGGAGGATGCAATCTGTAGAGATGAGAATGGTGGCAATAATATTTATTAG | 5943 | 0.4212 | MGSCGESGIVVDPSGGSVIEQHLCSEIPLQLVAGSEEACNVLDSNVDLSGMNDGCMGEGSASIVDVTEGSRDALVNECVNVDMSQLEKTSEDDCQNCLGICGEIEVSCLKSDGLCSEGNFQDEPSESITTNDLQKQCVQHGEQKDDESNMAGDDSAAMEGKNDDAGLLADAFNCVLDFRHSEMSLESESMNELRVDGNQQNEPEEIMNDTDTLLKVVGKCDALDGMEANACRQISPSQGMEVPSGALCTDTEVASTNDELCDQKDGEDWNSTCEENIKAAVDKEITINSRVLVSSSPGCHGTLRSSPVVDSLHEPTLLDPGSEMKNSILQIEDDFCKLNDSSPEGTTDSTFGKPFYPESGQPSVVLITNSSSKDVPDLLSKGDDVSINNNSAVDHPGETNNDGKEAVTVDCITESILLPSQRNSRRTKFGRKTQTKKASRKCKNKASMTHPCEVVKINSEAARKKRSCLSKPARSSIWGLLGNIKQLFQQETELEVSEAICQELGKARSKRQSRKAIKNGASSSSLSSVQKYSVSTSTTRVRLKIKIGKEIDLSCSNVLIPEAVGGSDSASYLESDSGSHRVASNTEDKFSEVATLGNLESFKNDLDKDCLVLNGQIANTHLENTEITEKSDGDAEEPCLTVPPEKVIEALVEPINNKVMDPGTSPDSEVINSIPEVQVGERHEEDVHHAALGSSKEFNPNLDVTISKRGKKKDKLISGNRVTENGSQGPPGNNKVKHSKNRRRKKNCSDAVSSLELPTSTEISKSVNSKELSAETLPLSGEIELGGSTKDLKVQGHVEVKTTCKPSVDNGHSETQGSENLLSSARSLGRKLPKSLKPRKVSKAKPKASDSESRKKTTPRCKEKQKKPIKSEVKGKGVSLKVTCEVDDGSHPAHVAGNHKLDAVGKINASDNRLSVNVSDLDMLPGVGLGEQHPSPHNAWVRCDDCHKWRRIPAVLADLIDETNCTWTCKDSSDKAFADCAIPQEKSNAEINAELGLSDASGEEDVYEDSKNYKELEYRLPLVSQESTFTRIFTNEFLHRSCKTQTIDEIMVCHCKPPPEGKLGCGDECLNRMLNIECVQGTCPCGDCCSNQQFQKRKYASLKWFKCGKKGYGLRALGNVAKGQFLIEYVGEVLDVHAYEARQREYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEELTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGGDPLNAELIVQGDSDDEFPEPVMLTEDGEIEDSVPIPKYFDNVDTESSKHLLKDKGGLDKSTTAIHADGSSEKESSMNPASAVSLLHSSVEVEDSKGNLPSSVQIEEISQQMEDVTSKPIPAVQQGYAMESESVDKTSCIQRLETTSSLTTVSKVLSNSTGSNKESKSEIVEGRNDFSESHLLVKTPKLKGSVKKGKVRANPSNGLKAEVTANQLQVSSIKHKKTVEGSSNGRFEAVQEKLSELLDGDGGISKRKDATKGYLKLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRAVLNDIISKNGLQMLHNIMKQYRQDFKKIPILRKLLKVLEYLAAGKILTSEHINSGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRPVRKHGYMDRDDNRVESHRSFNCNRFSSLHNHRHEQDFKSTEAIDCGQQSMLVTTSADAGAQEGCSPGSLDRVEINGPKKRKRKSRWDQPAETNSHSDVVISSNDESQNIHEDVPPGFSCPIRSLNTSLNSGDPALQNASHSGCPSDLVIGHPKEKFNSRLPVSYGMPWSVAQQYGTPHAEITECWITAPGMPFNPFPPLPPYPRDDKDCQPSNTTDAMAIDQPAEVKQWDTSGRVNCCSDDMIPSTTGSNPEDMNLPCEDNKHITKRLKGDSNDLGRRYFRQQKWNNSKIHRPWFKRNAWKCNGNNPSGDMCSIDVGDVPKESKVTCSSEDAICRDENGGNNIY* | 1981 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g01952 | 1980 | ProSiteProfiles | Zinc finger CW-type profile. | 934 | 988 | IPR011124 | GO:0008270 | |
Rops10g01952 | 1980 | ProSiteProfiles | SET domain profile. | 1100 | 1217 | IPR001214 | GO:0005515 | |
Rops10g01952 | 1980 | SMART | PostSET_3 | 1225 | 1241 | IPR003616 | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 1306 | 1324 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 806 | 822 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 707 | 773 | - | - | |
Rops10g01952 | 1980 | CDD | SET_SETD2 | 1099 | 1241 | IPR044437 | GO:0010452|GO:0046975 | |
Rops10g01952 | 1980 | FunFam | Histone-lysine N-methyltransferase | 999 | 1256 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 843 | 874 | - | - | |
Rops10g01952 | 1980 | Pfam | CW-type Zinc Finger | 940 | 986 | IPR011124 | GO:0008270 | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 425 | 444 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 140 | 162 | - | - | |
Rops10g01952 | 1980 | SMART | shorttest3 | 1048 | 1099 | IPR006560 | GO:0005634|GO:0042054 | |
Rops10g01952 | 1980 | Gene3D | SET domain | 996 | 1249 | IPR046341 | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 423 | 445 | - | - | |
Rops10g01952 | 1980 | ProSiteProfiles | AWS domain profile. | 1048 | 1098 | IPR006560 | GO:0005634|GO:0042054 | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 752 | 773 | - | - | |
Rops10g01952 | 1980 | Gene3D | - | 930 | 993 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 383 | 397 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 830 | 874 | - | - | |
Rops10g01952 | 1980 | ProSiteProfiles | Post-SET domain profile. | 1225 | 1241 | IPR003616 | - | |
Rops10g01952 | 1980 | PANTHER | SET DOMAIN PROTEINS | 438 | 1728 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 720 | 735 | - | - | |
Rops10g01952 | 1980 | FunFam | Histone-lysine N-methyltransferase | 932 | 993 | - | - | |
Rops10g01952 | 1980 | SUPERFAMILY | SET domain | 1033 | 1238 | IPR046341 | - | |
Rops10g01952 | 1980 | Pfam | SET domain | 1111 | 1217 | IPR001214 | GO:0005515 | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 1692 | 1745 | - | - | |
Rops10g01952 | 1980 | Pfam | AWS domain | 1063 | 1097 | IPR006560 | GO:0005634|GO:0042054 | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 1727 | 1745 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 803 | 822 | - | - | |
Rops10g01952 | 1980 | SMART | set_7 | 1100 | 1223 | IPR001214 | GO:0005515 | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 382 | 403 | - | - | |
Rops10g01952 | 1980 | MobiDBLite | consensus disorder prediction | 1293 | 1324 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g01952 | Rops-Chr10 | 35653036 | 35670690 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g01952 | 1083 | 1240 | C2H2 Transcription Factor Family | AT2G23740 | 32.597 | 5.12e-19 | 92.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Rops10g01952 | SET | 4e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g01952 | - | - | gmx:100795379 | 2859.71 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops10g01952 | 10 | 35653036 | 35670690 | Rops10g01952 | 10 | 35653036 | 35670690 | ECH |