Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01914 ATGGAGTTTGTGGATACCAGAAAACTACAGCTACAACAACAGAAGCAACATTTTCATGTGTTGGCAGTTGATGATAGTGTCATTGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGTCTTATTGATGACCTTGAAAATACTTCTTCAAGGTCTTTAGAATCGTCAATTTCTCCTCCTCAACCATTGCAGCAAGAGGGAATCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTTGTGATTATGTCATCAGAAAATGTACCTTCTAGAATCAGCATGTGCTTGGAAGAAGGGGCAGATGAGTTTCTATTGAAGCCACTTCAGTCATCAGATTTGGATAAGCTTCAGTCATATTTTCCCAAAACCCTTGATAATGCTAGTGATCAAGAATCTGCTAACAGTTCCATAGATTCTGAATATGACAATCTCATCGACAACAACAATAACAGTAATAGTAGCAGTAATAGTATTAGCAAAAGGAAGGCCATGTCTCCTGAGCCTCCAGAGAGATCAAGACCAAAAATGAAAGGGTTGGCGGTGGTGTAA 666 0.3994 MEFVDTRKLQLQQQKQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLENTSSRSLESSISPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGADEFLLKPLQSSDLDKLQSYFPKTLDNASDQESANSSIDSEYDNLIDNNNNSNSSSNSISKRKAMSPEPPERSRPKMKGLAVV* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01914 221 ProSiteProfiles Response regulatory domain profile. 19 160 IPR001789 GO:0000160
Rops10g01914 221 Gene3D - 19 203 - -
Rops10g01914 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 193 IPR045279 GO:0009736
Rops10g01914 221 MobiDBLite consensus disorder prediction 163 201 - -
Rops10g01914 221 Pfam Response regulator receiver domain 20 153 IPR001789 GO:0000160
Rops10g01914 221 SUPERFAMILY CheY-like 18 153 IPR011006 -
Rops10g01914 221 CDD REC_typeA_ARR 20 155 - -
Rops10g01914 221 SMART REC_2 18 156 IPR001789 GO:0000160
Rops10g01914 221 MobiDBLite consensus disorder prediction 163 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01914 Rops-Chr10 35246366 35249242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01914 17 162 Response Regulator Gene Family AT3G57040 60.544 6.11e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops10g01914 Response_reg 9.5e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01914 K14492 - gmx:100801334 332.413