LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g01911	ATGGCTGCTTTTGGTGGCGCCGCCGCCGCGCGCATGATCCCCTCCGTTACCAGAACCTCCGTCTCGCTCTCCTCTTCTTCCCGTTCGTTCTTCTCTTTCTCTTCTGGTTCCTCTCTCGATTGCTTGCGGTCATGTCCTCGCATTTCTCACCTGTTTCTCGATCAGAAAAGAGCAGAGGTTCGTGTTTCGAGTAGAGGATATGGAACTGTGTCTACACCTAAGGCACTTGCTTCTGATCCTTTTCAGCTGAAGAGCGCTAAAGAAGATATCAAGGAGCTTCTCAGGACTAAGTTCTGTCATCCTATTTTGATTCGTTTGGGATGGCATGATTCTGGTACTTATAATAAGAACATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAGTTGAACAGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAAGCTTCTTCAACCGATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTATTTCAGTTGGCTGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCGAAAATCCCGATGAAATATGGAAGAGTGGATGTTTCTGGACCTGAACAATGCCCAGAAGAAGGGAGACTTCCAGATGCTGGCCCCCCTTCTCCTGCTGATCATTTGCGTCAAGTTTTCTATCGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGTCTAGACCAGATCGTAGTGGCTGGGGCAAGCCTGAGACTAAATATACGAAAGATGGGCCGGGGGCACCTGGAGGACAATCCTGGACAGTGCAATGGTTGAAGTTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAGGGATGAAGATCTATTGGTATTGCCAACTGATGCTGTTCTTTTTGAAGATCCATCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCCAAACTTAGTAACCTCGGAGCCAAATTTGATCCTCCAGAGGGAATCTTTATAGATGGTTCTCCAAATGCTGGGGAGAAGTTTGAAGCAGCCAAGTACTCATCTGGAAAGGAGTAA	1107	0.4616	MAAFGGAAAARMIPSVTRTSVSLSSSSRSFFSFSSGSSLDCLRSCPRISHLFLDQKRAEVRVSSRGYGTVSTPKALASDPFQLKSAKEDIKELLRTKFCHPILIRLGWHDSGTYNKNIEEWPQRGGANGSLRFEVEQKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVSGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIFIDGSPNAGEKFEAAKYSSGKE*	369

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g01911	368	Pfam	Peroxidase	87	318	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Rops10g01911	368	Gene3D	-	86	339	-	-
	Rops10g01911	368	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	69	340	IPR044831	GO:0004601\|GO:0034599
	Rops10g01911	368	MobiDBLite	consensus disorder prediction	237	265	-	-
	Rops10g01911	368	ProSitePatterns	Peroxidases proximal heme-ligand signature.	230	240	IPR019793	-
	Rops10g01911	368	SUPERFAMILY	Heme-dependent peroxidases	77	339	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Rops10g01911	368	FunFam	L-ascorbate peroxidase S chloroplastic/mitochondrial	86	210	-	-
	Rops10g01911	368	Gene3D	Peroxidase, domain 2	208	331	-	-
	Rops10g01911	368	PRINTS	Haem peroxidase superfamily signature	100	114	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Rops10g01911	368	PRINTS	Haem peroxidase superfamily signature	180	192	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops10g01911	Rops-Chr10	35194133	35201962	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops10g01911	103	333	Peroxidase	AT2G18140	28.571	1.04e-18	84.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g01911	K00434		-	gmx:100802238	639.417

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