Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01908 ATGTCGAGTGAGGAGTCGCAGAAGAAGGTATTCAACGCAGAAACAGAAACGGCGTCGTCGCTGGTGAAGGAGTTGAGGGGCAACTTCGCTTCGGGTAGGACGCGAAGTTATGAATGGAGAGTTTCACAGTTGAAGGCCTTTTTGAAGATGGTGGCTGAAAACGAGGATCAGATAGTTGAAGCTCTTCGTTCTGACCTTGCTAAGCCTCCACTTGAAACCGTCGTCTATGAGATTGGTATGTTTAAAAACTCATGTGAAGTCACGCTGAAGGATTTGAAACATTGGATGAAGCCAGAAAAGGTTAAAACTTCAATCGCAACTTTTCCATCTTCAGCTGAAATAGTACCTGAACCGCTGGGCGTTGTGTTGGTCATCTCTGCATGGAACTATCCATTTTTGTTGTCTCTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAACCATCAGAAATTGCACCAGCCACATCTGCAGTGCTGAAAAAATTGTTAGGGAAGTACATGGATAACTCATGTATCAGAGTAGTGGAGGGGGCAGTTGATGAAACAACCGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAAAGTGGGACGCATTGTGATGACTGCTGCTGCAAAACACTTAACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATACCAATTTACAAGTTTCTGCTAGACGGATAATTTCAGGCAAGTGGGGATTGAACAATGGACAAGCCTGCATTTCTCCAGATTATATTATAACAACAAAAGACTATGCTTCCAAGTTGGTGGATGCACTAAAGACTGAATTGGAGAACTTTTATGGAAAGAACCCTTTGGAATCAAAAGATTTGTCCCGCATTGTGAGTTCCAACCACTTTGCTCGCTTGGCAAAGCTCTTGGATGATGATAAGGTTTCTGGCAAGATTGTTCATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGCTCCCACTATTTTATTGGATGTTCCACGAGATTCTCTGATAATGGGTGAGGAGATCTTTGGTCCACTGCTTCCCATCGTTACGGTCAATAAACTGGAAGAAAGCTTCGATGTGATCAACTCAGGAACAAAGCCCCTTGCTGCATATGTATTTACAAGTGACAAGAAGTTCAAGGAGCAGTTTGTGATGAATGTTCCTGCAGGGGGTTTGCTTGTCAATGACACTACCTTACATCTTGTGGTTCCTACTTTGCCATTTGGGGGTGTTGGAGAGAGTGGAATGGGTTCATACCATGGGAAATTCTCCTTTGATGCTTTCACCCACAAAAAGGCAGTTCTTTATCGCAGTTTTCTTGGTGACGCGTCAATTAGGTACCCACCATACACGGATTCAAAGCTGAGATTGATGAAGGCTCTCATTGCTGGTGGTTTTCTTGGCATAATTCGTGCTCTTTTTGGATGGTCCTAA 1473 0.4331 MSSEESQKKVFNAETETASSLVKELRGNFASGRTRSYEWRVSQLKAFLKMVAENEDQIVEALRSDLAKPPLETVVYEIGMFKNSCEVTLKDLKHWMKPEKVKTSIATFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSAVLKKLLGKYMDNSCIRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVVLELGGKSPVVVDSNTNLQVSARRIISGKWGLNNGQACISPDYIITTKDYASKLVDALKTELENFYGKNPLESKDLSRIVSSNHFARLAKLLDDDKVSGKIVHGGEKDESKLRIAPTILLDVPRDSLIMGEEIFGPLLPIVTVNKLEESFDVINSGTKPLAAYVFTSDKKFKEQFVMNVPAGGLLVNDTTLHLVVPTLPFGGVGESGMGSYHGKFSFDAFTHKKAVLYRSFLGDASIRYPPYTDSKLRLMKALIAGGFLGIIRALFGWS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01908 490 PIRSF ALDH 3 479 IPR012394 GO:0006081
Rops10g01908 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 445 IPR016162 GO:0016491
Rops10g01908 490 Pfam Aldehyde dehydrogenase family 5 447 IPR015590 GO:0016491
Rops10g01908 490 FunFam Aldehyde dehydrogenase 26 230 - -
Rops10g01908 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 227 427 IPR016163 GO:0016620
Rops10g01908 490 SUPERFAMILY ALDH-like 21 459 IPR016161 GO:0016491
Rops10g01908 490 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 223 230 IPR029510 GO:0016491
Rops10g01908 490 PANTHER ALDEHYDE DEHYDROGENASE 15 478 IPR012394 GO:0006081
Rops10g01908 490 FunFam Aldehyde dehydrogenase 227 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01908 Rops-Chr10 35160537 35166131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01908 18 490 Aldehyde Dehydrogenase Gene Family AT4G34240 65.328 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01908 K00128 - gmx:100783726 836.254